Gene M446_4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4428 
Symbol 
ID6130310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4881719 
End bp4882870 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content75% 
IMG OID641644569 
Productdiguanylate cyclase 
Protein accessionYP_001771204 
Protein GI170742549 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.924554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG TGGCGACATT GCTGGCCGTC GCGACGTGCC TCTGTTTCAT CGTCGGCCTG 
CTGTTCCTCC TGTCCTGGCG CCAAGCGCCC CGGACCCGGG CGCTCGCGAT CTGGGGCGTC
GGGCATCTGC TCGCGGCGGT TGCATCGGTC CTCCTCGCGG GGCAGGGCAC GCTGCCCGAC
CTGGTCTCCA TCGGCCTCGC GAACGCGCTG ATGCTGGGCG CCTTCGGCCT GATGTGGAGC
GGCGCGCGCA GCTTCGAGGG GCGCCGGACG CCCCTCGCCG CCCTGGCGGC CGCCCCCGCC
CTCTGGTGCG CGGCCTGCGC GGTCCCGGCT TTCCTGGCGA GTTCCTCGGG GCGGGTGATG
CTCGTCGCGG CCCTCGCGGC GGTGCCGTGC GGCCTCACCG CGCGCGAGAT CTGGCGCGGG
CGCGGGGAGC CGCTCGTCTC CCGCCTCCCG GCGGCCGCCC TGACGGCGAG CGAGGCGCTC
CTCTTCGTGG TCCGGATCCC GCTCACCGCC CTGCGGCCGC CGAGCGAGCC CTATCCCCTC
ACGCTCCCGG GGATGGGCGC CCTGGTCCTG CTGGGCCTGC TCTACACGGT GGCGCTGGCC
TTCCTGTTCC TGGCCCTGGC CAAGGAGCGG CTCGAATGGC AGCAGCGGCT CAGCGCGCTC
ACCGATCCGC TCACCGGGGC GCTCAACCGG CGCGGCCTGG AGCAGGCCGC CGCCTGCGTG
CTGGCGGGCG GGCCGGCGAC GCTCCTCCTC CTCGATCTCG ATCACTTCAA GCGCGTGAAC
GACACCTACG GGCACGGGGT CGGGGACGAG GTGCTCGTCG CCTGCGCTGC CGCGATGCCG
GGGTGTCTCC CGCCGCGGGC GGTGATCGGG CGCCTGGGCG GCGAGGAATT CGCCTGCCTG
CTGCCGGACG GGGAGGGGGC GGGGGAGATC GCCGAAGCGA TCCGGCGGGC CGTGGCGGCG
CTGCGCCTGG AGCGCGCGCC GGACCTGCAC GTGACGGCGA GCATCGGCGC CGCGCGGGGC
GGTTCGGAGC TTCAATGCCT GATCGCCAGG GCCGATCGGG CGCTCTACCG CGCAAAGCGC
GGCGGTCGCA ACCGCGTCGC CTGGGATCCC GACCGCGTCG GGCCGCCTCC CGATCTCGAC
CTCGCGTCGT GA
 
Protein sequence
MLDVATLLAV ATCLCFIVGL LFLLSWRQAP RTRALAIWGV GHLLAAVASV LLAGQGTLPD 
LVSIGLANAL MLGAFGLMWS GARSFEGRRT PLAALAAAPA LWCAACAVPA FLASSSGRVM
LVAALAAVPC GLTAREIWRG RGEPLVSRLP AAALTASEAL LFVVRIPLTA LRPPSEPYPL
TLPGMGALVL LGLLYTVALA FLFLALAKER LEWQQRLSAL TDPLTGALNR RGLEQAAACV
LAGGPATLLL LDLDHFKRVN DTYGHGVGDE VLVACAAAMP GCLPPRAVIG RLGGEEFACL
LPDGEGAGEI AEAIRRAVAA LRLERAPDLH VTASIGAARG GSELQCLIAR ADRALYRAKR
GGRNRVAWDP DRVGPPPDLD LAS