Gene M446_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4215 
Symbol 
ID6135417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4652501 
End bp4654249 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content75% 
IMG OID641644359 
Productsignal transduction histidine kinase 
Protein accessionYP_001770998 
Protein GI170742343 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0433147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGG AGAGCGCCAC CGACTACGCC ATCATCACCC TCGACGAGAG CGGGTCCGTC 
ACCAGCTGGA ACGAGGGCGC GCGGCGCATC CTCGGCTGGA GCGAGGAGGA GATGCTGGGC
CAGCCGGCCG CCCGCTTCTT CACCGAGCCG GACGTCCGCC GCGGCGTCCC CGAGGAGGAG
ATGCGCAACG CGCGCCTCAC CGGCACCGGG CCGGACGAGC GCTGGCACCT GCGCAAGGAC
GGCAGCCGCT TCTGGGCGAG CGGCGAGATG CAGCCACTGC GCGATGAGGC GGGCCATCAC
CTGGGCTACC TGAAGATCCT GCGCGACCGC ACCGCCCAGC GCGACCAGGA GGAGCGGCTG
CGCCAGAGCG AGGATCGGCT GAACCTCGCC CTCGGCGCCG CCGGCATGGT CGGCATCTGG
GAGTGGGACC TGCGCCGCGA CCTCGTCTTC GCGGACGCGA ACTTCGCCCG GATCTACTCG
GTCGACCCGG AGCACGCCGC CCGCGGCGCC CCGCTCGCGG CCTTCACCCG GACCTTCCAC
CCCGACGACG TGCCGGCCTT CGAGGCAGAG CTCGACCGGG TGCTGTCGGG GCGCCGGGAC
GCGTTCTCGG CGGAGTACCG GGTGCGCCAG CCGGACGGGT CCTGGCGCTG GCTCCTCGCC
CGCGGCCGCC TGATGCGCGA CGAGGACGGC GCGGCCTCGC GCTTCGCCGG GGCGAGCGTC
GACATCACCG AGCAGAAGCA GACCGCGCAG CGCGCCCGCG AGAGCGAGAC CCGCTTTCGG
CAGCTGACCG AACTCGCCCC GGGCATCGTC TGGGAGGGCC GGCCGGACGG GTCGCTCAGC
TACCTCAACG CCTTCTGGTA CCGCTACACC GGCCAGAGCC CCGAGGAGGC GCTGCCGGAC
GGCTGGGCCC GCGCGGTCCA TCCGGACGAC CTGCCGGGGC TGGAGGTGGC CTGGGCGCGG
GCGCGCCGGG AGGGAATCCA GTACGACACC GAGGCGCGGC TGCGCCGGCA CGACGGCACC
TACCGCTGGT TCCTGATCCG CGCCGCGCCG GTGCGGGACG AGCGGGGCGC GATCATCGGC
TGGCTCGGCA ACGACCTCGA CATCCAGGAC CGCAAGGAGG CCGAGGAGCA CCAGCGGCTC
CTCACCCACG AATTGCAGCA CCGGGTGAAG AACACCCTCG CCATGGTGCA GGCCATCGCG
GCCCAGACCC TGCGCGGGGT GAGCGGGCTC GACGAGGCGC GGGAGGCCCT CGCCGGGCGG
CTGATCTCCC TCGGGCGGGC GCACGACATC CTGACCGAGG CGCATTGGAA GGCCGCCCCG
ATCTCCGAGA TCATCGAGGC CGCCCGCGGC GCCCACGAGG CGGCGGACGC GGTGCGGATC
CGCGCCCGCG GCCCCGACCT GACGCTCGCG GCGAAACCCG CCCTCGCCCT CGCCATGGCC
CTGCACGAAC TCGCGACCAA CGCCGCGAAA TACGGGGCGC TCGCGACACC GGCGGGCCGC
GTCGATCTCG CCTGGACGGT CGAGCCGGCC CCCGGCGGGT CGCGCCTGCG CCTGACTTGG
ACCGAGCGCG GCGGCCCGCC GATCGACCGG CCGCCCCTCC GCAGGGGCTT CGGCACGCGG
CTGCTGGAGC GCAGCTTCGC CGCGGAGGTG GGCGGCGCGG TGACGCTCAC CTTCGCGCCC
TCCGGGCTGG TCTGTACGCT GGAAGCCCCC CTGAGCGCCC TGCAGGAGCC GTGGCGGGCA
CCCGCGTGA
 
Protein sequence
MILESATDYA IITLDESGSV TSWNEGARRI LGWSEEEMLG QPAARFFTEP DVRRGVPEEE 
MRNARLTGTG PDERWHLRKD GSRFWASGEM QPLRDEAGHH LGYLKILRDR TAQRDQEERL
RQSEDRLNLA LGAAGMVGIW EWDLRRDLVF ADANFARIYS VDPEHAARGA PLAAFTRTFH
PDDVPAFEAE LDRVLSGRRD AFSAEYRVRQ PDGSWRWLLA RGRLMRDEDG AASRFAGASV
DITEQKQTAQ RARESETRFR QLTELAPGIV WEGRPDGSLS YLNAFWYRYT GQSPEEALPD
GWARAVHPDD LPGLEVAWAR ARREGIQYDT EARLRRHDGT YRWFLIRAAP VRDERGAIIG
WLGNDLDIQD RKEAEEHQRL LTHELQHRVK NTLAMVQAIA AQTLRGVSGL DEAREALAGR
LISLGRAHDI LTEAHWKAAP ISEIIEAARG AHEAADAVRI RARGPDLTLA AKPALALAMA
LHELATNAAK YGALATPAGR VDLAWTVEPA PGGSRLRLTW TERGGPPIDR PPLRRGFGTR
LLERSFAAEV GGAVTLTFAP SGLVCTLEAP LSALQEPWRA PA