Gene M446_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3978 
Symbol 
ID6131603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4427988 
End bp4428974 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID641644137 
Producthypothetical protein 
Protein accessionYP_001770777 
Protein GI170742122 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.890464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAC GGGAGTTGCT GGCGGGCGCG GCGGCTGGGT TCCTGTCCTC GACCTGCTTA 
GTTCACGCGA GGCCGACAGG AGCTGCCCGC ATCGGGGTGC TGTGGCACGC CCGGGACGCG
CAAGAGGAGG CGCCGTTCCA AGTCCCGTTC CTGAAAGGGT TCACAGACCT CGGATATGAG
CCTGGTCGAG ACGTGCTTTT CGAACACCGC TATGCAAACG AGCAGTACGA TCGCTTCGTG
GCGTTGGCGA ACGAGCTGAT CGCCCTGAAG CCCGACGTGC TGGTCGCCGT GACCCGGCCA
GCCGCTGAGG CAGCCAAGAG GGCGACCAGC ACCATCCCGA TCGTGTTCGT TGTCGTGCCT
GATCCCGTCG GTTCCGGCTT GGTCGAGAGT CTTGCTAGGC CCGGCGGCAA CGTGACGGGC
CTGTCCAACG TGGCCACCGA CCTCACCGCC AAGCGGCTCT CGATCCTCAA GGAAGCCGTC
CCGAACGTGA GACGCGTCGC CCTGCTGCTG AACCCGACCG ATGCCGGATT GGCGCGCCGC
TTCCTGGAGG ACTCGCGGGC CGCTGCCATT CGGCTCAGAC TGGAGGTCGT TCCGGTCGAA
GTGCGTTCCC GTGATGACAT CGACGGAGCG TTCGAGCAGA TCGACGCAGC GCACGCGGAC
GGCCTCGTGA TTAATAACGA CCCCATGATC ATGAACGAGC GGGCGAAAGT GAATGCGGCC
ACTCTCAGCC GTCGCTTGCC CACAATGCTC TTCATTCCAC TCATGGTGAA GAGCGGTGGC
CTAATGTCTT ACTCTCCAGA TATTCCAGGA ATATTTCGAC ATACCGCAAC ATTAGTGGAT
CGCATCCTCA AGGGCACCAA GACAAGCGAT CTTCCCGTTG AACAGCCGGA CGTTTTCCGC
CTGACGATCA ACATGCAAAC TGCGGAGGCG ATGAAAATTA CCCTGCCGCC TGCGCTACTC
GCCCGTGCCG ACGAGGTAAT CGAATGA
 
Protein sequence
MRRRELLAGA AAGFLSSTCL VHARPTGAAR IGVLWHARDA QEEAPFQVPF LKGFTDLGYE 
PGRDVLFEHR YANEQYDRFV ALANELIALK PDVLVAVTRP AAEAAKRATS TIPIVFVVVP
DPVGSGLVES LARPGGNVTG LSNVATDLTA KRLSILKEAV PNVRRVALLL NPTDAGLARR
FLEDSRAAAI RLRLEVVPVE VRSRDDIDGA FEQIDAAHAD GLVINNDPMI MNERAKVNAA
TLSRRLPTML FIPLMVKSGG LMSYSPDIPG IFRHTATLVD RILKGTKTSD LPVEQPDVFR
LTINMQTAEA MKITLPPALL ARADEVIE