Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3927 |
Symbol | |
ID | 6134899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4375378 |
End bp | 4376979 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641644085 |
Product | extracellular solute-binding protein |
Protein accession | YP_001770727 |
Protein GI | 170742072 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.180708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0370442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCA GATCGCTGCT GAAGGCAATG GCCGGCGCGG GCGCGCTCGC CGCCGGACCC TCCTTCCCGG CCCCGGCCCT CGCCCAGGGC GCGGCCAAGA CCCTGCGCTT CGTCCCGCAG GCGAACCTCG CCAATTTCGA CCCGATCTGG GGGACCCAGT ACGTGGTGCG CAACGCCGCG GCCCTGGTCT GGGACACGCT CTACGGGGTC GACGCGCAGC TGCGGCCCCA GCGCCAGATG GTCGAATCCG AGACCGTCTC GTCGGACGGG CTGACCTGGA CCTTCACCCT GCGGCCGGGC TTGAAGTTCC ACGACGGCGA GCCGGTGCGG GCGCGGGACG CGGTGGCGAG CCTCGTGCGC TGGTCGGCCC GCGACCCGAT GGGGCTGATG ATCCGGGCGA TCCAGGCGGA GCTCTCGGCG GTCGACGACC GCAGCTTCCG CTGGGTGCTG ACCAAGCCCT ACCCGAAGAT GCTCCTGGCG CTCGCCAAGA ACAACGCGCC CTGCTCCTTC GTGATGCCCG AGCGCATCGC CCAGACCGAC CCGTTCAAGC AGATCACCGA GTATGTCGGC TCCGGGCCGA TGCGCTTCGC CCGCGACGAG TGGGTGCCGG GGGCGCGGGC GGTGTTCACG CGCTTCGCCG ATTACGTCCC GCGCCAGGAG CCGGCCTCCT GGCTCGCGGG CGGCAAGCAG ATCGCCTTCG ACCGGGTCGA GTGGATCATC ATGCCGGACC CGGCCAGCGC CTCGGCGGCC CTGCAGAACG GCGAGGTCGA TTGGTGGGAG AACCCGATCG CCGACCTCGT CCCGCTGCTC AAGAAGAACC GCAACATCCA GGTCGACATC GCCGACCCGC TCGGCAACGT CGGCTCGTTC CGGATGAACA CGCTGCACCC GCCCTTCAAC AACCAGCTGG TGCGCCGCGC GGTCCTGATG GCGATGAACC AGGAGGACTA CATGCGGGCG ATCGTCGGCG ACGACGACGC GCTGTGGAAG CCGCTGCCCG GCTACTTCAC GCCCGGGACG CCGCTCTACA ACGAGGAGGG CGGCGAGGTG GTCAAGCCCG GCGGCGACCT CGCGGCGGCC AGGAAGCTCC TGGCCGAGAG CGGCTACAAG GGCGAGCCGG TGACCTGCGT GGTGGCGCAG GACCAGCCGA TCACCAAGGC GCAGGGCGAC GTCACCGCCG ACCTGCTCAA GAAGCTCGGC ATGAACGTCG ACTTCGTGGC GACCGACTGG GGCACCGTCG GCGCCCGCCG CGCCTCCAAG GCGCCGCCCA AGGACGGCGG CTGGAGCATG TTCCACACCT GGCATGCCGG GGCGGATTGC CTGAGCCCGG TCGGCTACAC GGCGATCCGG GCCAACGGCG ACAAGGCGTG GTTCGGCTGG CCCGACAGCC CGCCGGTGGA GGCCGCGATC ACCGGCTGGT TCGAGGCGGC GACGCCGGAG GACGAGAAGG CCGCCATGCG CCGCCTCAAC AAGGCCGCCC TCGACTACGT GGTCTACGTG CCGACCGGCT TCTTCCTCAC CTACCAGGCG TGGCGGACAT CGCTGAGCGG CGTCACCAAG GGCCCCCTGC CCTTCTTCTG GGGCGTGTCG AAATCGGCGT GA
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Protein sequence | MDRRSLLKAM AGAGALAAGP SFPAPALAQG AAKTLRFVPQ ANLANFDPIW GTQYVVRNAA ALVWDTLYGV DAQLRPQRQM VESETVSSDG LTWTFTLRPG LKFHDGEPVR ARDAVASLVR WSARDPMGLM IRAIQAELSA VDDRSFRWVL TKPYPKMLLA LAKNNAPCSF VMPERIAQTD PFKQITEYVG SGPMRFARDE WVPGARAVFT RFADYVPRQE PASWLAGGKQ IAFDRVEWII MPDPASASAA LQNGEVDWWE NPIADLVPLL KKNRNIQVDI ADPLGNVGSF RMNTLHPPFN NQLVRRAVLM AMNQEDYMRA IVGDDDALWK PLPGYFTPGT PLYNEEGGEV VKPGGDLAAA RKLLAESGYK GEPVTCVVAQ DQPITKAQGD VTADLLKKLG MNVDFVATDW GTVGARRASK APPKDGGWSM FHTWHAGADC LSPVGYTAIR ANGDKAWFGW PDSPPVEAAI TGWFEAATPE DEKAAMRRLN KAALDYVVYV PTGFFLTYQA WRTSLSGVTK GPLPFFWGVS KSA
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