Gene M446_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3924 
Symbol 
ID6134896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp4372452 
End bp4373441 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content74% 
IMG OID641644082 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001770724 
Protein GI170742069 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0138701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCC TCGAAGTCGA GAACCTCCGG ACCCATTTCC GCACGCCGGA CGGCATCAAC 
CGGGCGGTGG ACGGGGTGTC GTTCGAGGTC GAGACCGGCG AGACCGTGGC GATCGTCGGC 
GAATCCGGCT GCGGCAAGTC CGTCACCGCC AACTCGATCC TGCGCCTGAT CCCCGAGCGG 
GTCGGGCGCT CGACCGGGGC GATCCGCTTC GAGGGCCGCG ATCTCCTGGC GCTGCCGCCG 
CGCGCCATGC GGCAGATCCG CGGCAACGCG ATCGGCATGA TCTTCCAGGA GCCGATGACG 
AGCCTCAACC CGGTCCTCAC CGTGGGCCGC CAGATCGGCG AGACCCTGCG GCTGCACCAG 
GGCCTCGACC GGCGCCGGGC GGAGGCGCGC GCCGTCGAGA TGCTGAGCCT CGTCGGCATC 
CCGGAGCCGG CCCGGCGGGT GCGGGGCTAC CCCCACCAGC TCTCGGGCGG CATGCGCCAG 
CGGGTGATGA TCGCCATGGC GCTCGCCTGC AGCCCGAAGC TCCTGATCGC CGACGAGCCG 
ACCACCGCCC TCGACGTCAC CATCCAGGCC CAGATCCTCG ACCTGATGCG CGACCTCAAG 
CGCCGGGTCG GCGCCGCCAT CATCCTGATC ACCCACGATC TCGGGGTGGT GGCCGAGGTC 
GCGAGCCGGG TGATCGTGAT GTATGCGGGC CGCAAGATCG AGGAGGCGCC GGTCGAGGCC 
CTGTTCGCGC GGCCGCGCCA CCCCTACACG AGGGGCCTGC TCGGCGCGGT GCCGCGCCTC 
GGCAGCTCCC TCGGCGGGAG CCAGACCCGG CTCGCCGAGA TCCCCGGGCA GGTGCCGAGC 
CTCAAGAGCC GCATCACCGG CTGCGTCTTC GCCGGGCGCT GCCCCGCCGT GACCGACCTG 
TGCCGGGCGG TGGCGCCGGC GATCGCCCCC AAGGCGCCCG GCCACCTCGC CGCCTGCCAC 
CACGCCCCCG CGGAGGCGGC CGCCGCATGA
 
Protein sequence
MALLEVENLR THFRTPDGIN RAVDGVSFEV ETGETVAIVG ESGCGKSVTA NSILRLIPER 
VGRSTGAIRF EGRDLLALPP RAMRQIRGNA IGMIFQEPMT SLNPVLTVGR QIGETLRLHQ 
GLDRRRAEAR AVEMLSLVGI PEPARRVRGY PHQLSGGMRQ RVMIAMALAC SPKLLIADEP 
TTALDVTIQA QILDLMRDLK RRVGAAIILI THDLGVVAEV ASRVIVMYAG RKIEEAPVEA 
LFARPRHPYT RGLLGAVPRL GSSLGGSQTR LAEIPGQVPS LKSRITGCVF AGRCPAVTDL 
CRAVAPAIAP KAPGHLAACH HAPAEAAAA