Gene M446_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3839 
Symbol 
ID6131795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4277695 
End bp4278912 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content58% 
IMG OID641644005 
Productextracellular ligand-binding receptor 
Protein accessionYP_001770647 
Protein GI170741992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACC GTAGACGAGC TATTGCTGCT CTGGCGAGTG CGACGTTGCT GTCGTCGGTC 
CGCAGCGGCG GCGCCCAGAC AGGCGCGACC TTCCGGATTG GCGCTCTGAA TCCCATCACC
GGCGCCGGCG CCGCCTACGG CACCGGTATG CAGAAGATGA TCCTTGCGGC CGCGGAAGAG
GTGAATGCGG CCGGAGGCGC CGGAGGGCGG AGGATCGAGG TCTTGGCCGA GGACGATCAA
AGCCAGCCAC AGGCGGGCGT CCTCGCTGCC AAGAAGCTAG TCGAGATCAA CAAGGTCCAA
GCGCTGGTCG GAGTTTGGTC CTCCGGCGTC GCTCTGGCGA CGATTCCCAT CGCGAATGAC
GCAAACGCCA TCTTCATGGC CACCTCCGGC GCGCCAGAGT TGACGAGTCC GCATGTTAAC
GCTAAGAAAC TGGTCTATCG GTTCAACACA ACGGGTGACG GATTCGGGAA GGCATTTGCC
GAAGTCTGTA CAAAGGAAGG CTTCAAGCGG CCTGCAACGA TGGCCTTCAA CAACGCCTCA
GCCATCGGCA TCGTCGAAGG CTTTCGCAAG GCGTGGGTAG CGAAGGGCGG CAAGGTCGTC
GAAGCCGTAG TTTATGAGCC CAGCCAGCCC AGCTACCGGT CGGAACTACA GCGGGTACTG
TCGGCCAAGC CCGACGTGAT CGTCCTAGGA TCCTACCTGG CCGACACCAC CATCATCGTG
CGTGAATGGT TCCAGACAGG TGACGCCCAG AAATGGCTCA TTCCCGGCCA TGCTGCGAAT
GCCGACCTAA TCAAGGCTGT TGGACCGAAT GCGAGTGAAG GCTTGCTGGT GGTGAACTCT
ATTTCAAACG AGGCGTCCAC AGCTTACAGC AGGTATGACG CAGCCTACCG AAAGGCAATG
CGCGAATCGG GCGCGGTGAA CATCTACGCT GCCATGGCGT GGGATATGGT GATTGTGCTA
GCGCTCGCGA TAGAAGCTGC TGGCCCGAAT GCGGAAGTCT ACGATGTTAA CGCCAAAATC
AAAGAAATTG CAAATCCCCC TGGCAAGCAG GTCTCGAGCT TTTCTGAAGG CAAGGAGGCG
CTCAGGACCG GAAAAATCAA CTACGATGGC GCGTCATCTA CAGTCGATTT CAACGACAGC
TCTGACGTGA TGCCGGACTT CGATCTTGCA ATCGTCGAGC ATGGCAAGAT CAATCGTAAG
TATATCGTCA AGATCTGA
 
Protein sequence
MINRRRAIAA LASATLLSSV RSGGAQTGAT FRIGALNPIT GAGAAYGTGM QKMILAAAEE 
VNAAGGAGGR RIEVLAEDDQ SQPQAGVLAA KKLVEINKVQ ALVGVWSSGV ALATIPIAND
ANAIFMATSG APELTSPHVN AKKLVYRFNT TGDGFGKAFA EVCTKEGFKR PATMAFNNAS
AIGIVEGFRK AWVAKGGKVV EAVVYEPSQP SYRSELQRVL SAKPDVIVLG SYLADTTIIV
REWFQTGDAQ KWLIPGHAAN ADLIKAVGPN ASEGLLVVNS ISNEASTAYS RYDAAYRKAM
RESGAVNIYA AMAWDMVIVL ALAIEAAGPN AEVYDVNAKI KEIANPPGKQ VSSFSEGKEA
LRTGKINYDG ASSTVDFNDS SDVMPDFDLA IVEHGKINRK YIVKI