Gene M446_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3734 
Symbol 
ID6131156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4165210 
End bp4166736 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content74% 
IMG OID641643904 
Productphytoene desaturase 
Protein accessionYP_001770548 
Protein GI170741893 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.964384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0984598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAC TCGATGTCGC GCCGCCGCGA CACACCGCGC GGCCGCGCAA GCCCCATGCA 
GTGGTGATCG GCAGCGGCTT CGGCGGGCTC GCGGCGGCCG TGCGCCTCGG CGCCCGGGGC
TACCGGGTCA CCGTCCTGGA GCGGCTCGGC CAGCCGGGCG GGCGCGCCCG CGTGCATCGG
CAGGACGGCT TCACCTTCGA TGCCGGGCCG ACCATCGTCA CCGCGCCCTT CCTGTTCGAG
GAGCTCTGGG CGCTGTGCGG CCGGCGCCTC GACGAGGACG TCACCCTGGT GCCGATGCGG
CCCTTCTACC GCATCCGCTT CCACGACGGC GCCAGCGTCG ACGTGAGCGG CGACGAGGCC
GCGATGCGCG CGCAGGTGGC CCGCATCGCC CCCGGCGAGG TCGAGGCCTA CGGGCGCTTC
ATGGCGGCCT CGGAGGAGAT CTGCCGGGTC GGCTTCGAGC AGCTCGGCCA CGTCCCCTTC
GGCGAGGCCG GGACCATGCT GCGGGTCGCG CCCGACCTCC TGCGGCTCGG CGGGCACCGC
AGCGTCCACG GCCTCGTCTC GCGCTACTTC CGCGACGAGC GCCTGCGCAC CGTCTTCAGC
TTCCACCCGC TGCTGATCGG CGGCTCCCCC TTCCGGGCGA GCGCGATCTA CTGCCTGATC
GCCGCCCTCG AGCGGCGCTG GGGGGTGCAT TGGGCGATGG GCGGGACCGG CCGCCTCGTC
GAGGGGCTGG TGCGGCTGAT CGAGGGGCAG GGCGGGCGCC TGCGCTGCCA CGCCGAGGTG
ACGCGCATCC GCGTCGAGGG CGGCGCCGCG ACCGGGGTCG ACCTCGCCGA CGGCACCCGC
CTGCCGGCCG ACATCGTGGT GTCGAACGCC GATTCGGTCG TCACCGCCCT CGACCTCCTG
CCCCCGGAGG CCCGCGGCTG GCGCGAGCGG CGGCTCGCCC GCGCCTCTTC CTCGATGGGC
CTGTTCGTCT GGTACTTCGG CACGCGGCGC ACCTATCCGG ACGTGCCCCA CCACACGATC
CTGCTCGGGC CGCGCTACCG GGACCTCCTC GCCGACATCT TCCGCCGCAA GGTGCTGGCC
GAGGATTTCA GCCTCTACCT GCACCGGCCG ACCGCCACCG ATCCGGGCCT GGCCCCGCCG
GGCTGCGACG CCTTCTACGT GCTCAGCCCG GTGCCGAACC TCGACGGCGG CCAGGACTGG
GCGGCCCTCG CCGAACCTTA TCGGCAGCGC ATCGCCCGCC ACCTCGAAGC GACCCTGCTG
CCGGGCCTGT CGGAGGCCGT GGTCACCTCC CGGGTGACCA CGCCGCGGGA GTTCCGCGAC
GATTTCCGCG CCTATCGCGG CTCGGCCTTC GGCCTGGAGC CGATCCTCAG CCAGAGCGCC
TATTTCCGGC CGCACAACCG CAGCGACCGG GTGCGCCACC TCTACCTCGT CGGCGCCGGC
ACCCATCCGG GGGCGGGGCT GCCGGGCGTG CTCTCCTCCT CCAGGATCCT CGACCGGGTG
GTGCCGGATG CCTCTGTCTT CGCCTGA
 
Protein sequence
MLTLDVAPPR HTARPRKPHA VVIGSGFGGL AAAVRLGARG YRVTVLERLG QPGGRARVHR 
QDGFTFDAGP TIVTAPFLFE ELWALCGRRL DEDVTLVPMR PFYRIRFHDG ASVDVSGDEA
AMRAQVARIA PGEVEAYGRF MAASEEICRV GFEQLGHVPF GEAGTMLRVA PDLLRLGGHR
SVHGLVSRYF RDERLRTVFS FHPLLIGGSP FRASAIYCLI AALERRWGVH WAMGGTGRLV
EGLVRLIEGQ GGRLRCHAEV TRIRVEGGAA TGVDLADGTR LPADIVVSNA DSVVTALDLL
PPEARGWRER RLARASSSMG LFVWYFGTRR TYPDVPHHTI LLGPRYRDLL ADIFRRKVLA
EDFSLYLHRP TATDPGLAPP GCDAFYVLSP VPNLDGGQDW AALAEPYRQR IARHLEATLL
PGLSEAVVTS RVTTPREFRD DFRAYRGSAF GLEPILSQSA YFRPHNRSDR VRHLYLVGAG
THPGAGLPGV LSSSRILDRV VPDASVFA