Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3520 |
Symbol | |
ID | 6130271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 3925664 |
End bp | 3926887 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641643689 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001770337 |
Protein GI | 170741682 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.363976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.545433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTCGC GGTTCATCGG ATACGCGCTG GGGCTCTCGC TCGCGGCCTT CGCGGCCGCG GGCGGGCGGG CCGCCGAGGC GGTCAGCGAC GGCGTCGTGA AGGTCGGCAT CCTCACCGAC ATGTCGGGGA TCTACGCGGA CTTCACCGGC CGCGGCTCCG CGGTGGCGGC CCAGATCGCC ATCGACGAGG TCGGCGGCAA GGTGCTCGGC GCCCCGGTCG AACTGGTCGC GGCCGACCAC CAGAACAAGC CCGACATCGC CGCGAACCTC GCCCGCGAGT GGTTCGACCA GGGCAAGGTC GACATGATCG CCGATTTCCC GACCTCCTCC ACGGCGCTCG CCGTGATGGA GATCGCCCGC CAGAAGAACC GGGTGACGAT GCTCTCGGCG GGCGTCGCCA TGGCGGCGAT CACCGACAAG TGCTCGCCGC TCAGCGCGCA GTGGATGGTC AACACCGCCG CGCTCGCCGC CGGCACCGCC AAGGCGCTGC TCCGGGCCGG CCGCACATCC TGGTACTTCG TGACGGCGGA CTACACGTTC GGCCACTCGC TGGAGCGCGA CGCCGCCGCG GTGGTGGAGG CCGGGGGCGG CAAGGTGCTG GGCACCTCGC GCCATCCCTT CCCGGGAGGC GACTTCTCCT CCTACATGCT GAAGGCCCAG GCCACCGGCG CCCAGGTGAT CGCCCTCGCC AATGCCGGGG CCGACACCAT CAACGCCATC AAGCAGGCCG CCGAGTACGG CATCGGCCGC GGCGACAAGC AGGTCATCGC GCCGCTCCTC ACCTACATCA CGGACGTGAG GAGCCTCGGC CTCGCCAAGG CCGAGGGCAT GTACCTCACC GAGGCCTTCT ACTGGGACTT CGACGCGCGC TCGCGCGCCT TCGCGGAGAC CTACTTCGCA CGCACGAAGC GGATGCCGAG CGCCTCGCAG GCGGCGGTCT ACTCGGCGGT GCTGAGCTAC CTGCGGGCGA TCGAGGCCGC CGGCACCGAC GAGGCCGGCG CCGTGATGGC GAAGCTGCGG ACCATGACGA TCGACGACGC GGTGATCCGC AACGGCCGCC TGCGCGCGGA CGGCGCCCTG GTGCACGACC TGCTGCTGCT CCAGGTCAAG AAGCCCTCCG AGTCGAAGCG CGACTGGGAC TTCTACACCG TCAAGGCGGT GCTCAAGGGC GAGGACGTCT ATCCGAAGCC GAGCGACGCC TGCCCCCTCA ACGCCCGGGG CTGA
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Protein sequence | MRSRFIGYAL GLSLAAFAAA GGRAAEAVSD GVVKVGILTD MSGIYADFTG RGSAVAAQIA IDEVGGKVLG APVELVAADH QNKPDIAANL AREWFDQGKV DMIADFPTSS TALAVMEIAR QKNRVTMLSA GVAMAAITDK CSPLSAQWMV NTAALAAGTA KALLRAGRTS WYFVTADYTF GHSLERDAAA VVEAGGGKVL GTSRHPFPGG DFSSYMLKAQ ATGAQVIALA NAGADTINAI KQAAEYGIGR GDKQVIAPLL TYITDVRSLG LAKAEGMYLT EAFYWDFDAR SRAFAETYFA RTKRMPSASQ AAVYSAVLSY LRAIEAAGTD EAGAVMAKLR TMTIDDAVIR NGRLRADGAL VHDLLLLQVK KPSESKRDWD FYTVKAVLKG EDVYPKPSDA CPLNARG
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