Gene M446_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3443 
Symbol 
ID6131878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3827254 
End bp3827943 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content78% 
IMG OID641643611 
ProductNnrU family protein 
Protein accessionYP_001770263 
Protein GI170741608 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.276248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000167017 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAATTCG CCGCCGCCCT CGCGACCTTC CTGGTGGCCC ACTCGGTCCC GGCCGTCCCG 
CGCCTGCGCG GCCGGCTCGT GGCGCGCCTC GGCCGCCGCG CGTACCTCGT CGCCTATTCG
GCGCTGTCGC TCGCCCTGCT CGCGTGGCTG ATCGTCGCCG CGCGGCGCGC CGGGACGGTG
GCGCTGTGGG AGCCGGCGCG CTGGCAATGG GCCGTGCCGC TCGCCCTGAT GCCCGTCGCG
CTCTTCCTCA TCGCGGCCGG GCTCTTCGCC GCCAACCCGC TCTCCGTCTC CCTGCGCGCC
GGGGCGGAGC CGGGCCCGGT GACGGCGGTG ACCCGCCACC CGCTGATGTG GGGCTTCCTG
ATCTGGGCCC TGGCCCACAT CCCGCCCAAC GGCGACCTCG TCTCGGTGGT CCTGTTCGGC
GGGATGGCGG CGTTCTCGCT CGCGGGCTTC GCCCTCCTCG ACGCGAAGGC GCGGCGCCGG
CTCGGGGCGG AGCGGTGGCG GGCGCTGAGC CGGGGCACCT CGGTCGTCCC CTTCGCGGCC
ATCCTGGCCG GCCGCGCGCG CCTCGGACCG GTCCGCCCGC TGCTGCCCGC GGCCGCCGCG
GCCCTCGCGG CCTATGCGTG GTTCCTGGCG CAGGGGCACG CCCTGCTGAT CGGGCCCGAC
CCGCTGGCCT CCTTCCGGGC CCTCGGCTGA
 
Protein sequence
MEFAAALATF LVAHSVPAVP RLRGRLVARL GRRAYLVAYS ALSLALLAWL IVAARRAGTV 
ALWEPARWQW AVPLALMPVA LFLIAAGLFA ANPLSVSLRA GAEPGPVTAV TRHPLMWGFL
IWALAHIPPN GDLVSVVLFG GMAAFSLAGF ALLDAKARRR LGAERWRALS RGTSVVPFAA
ILAGRARLGP VRPLLPAAAA ALAAYAWFLA QGHALLIGPD PLASFRALG