Gene M446_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3438 
Symbol 
ID6131873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3817224 
End bp3818207 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content75% 
IMG OID641643607 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001770259 
Protein GI170741604 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.454566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00428994 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGGGT CTGCCGAGCG CGACGAGCAG CCGGTCGAGG CCGCGATCGG CTGGATGGTC 
GAACTCAGTT CCGGCGCGGT CACCGAGCGC CAGAGGCGCG CCTTCGAGGC CTGGCTCGCC
GCCGATCCGG GCCACGAAGC GGCGTGGCTC GGGTTGCAGG AGAGCCTGAT GCCCTGCGGC
GTCGCCGCCC GCCAGAGATT GCCGCCGGGC CGGCTGACGC AGCGGCTCCT CGCGCGCCAG
CCCAACCGGC GCGCCGTGCT GACGGGCGTC GCGGCCGCGC TCGGCCTCGG AGCGGCCGGC
AGCCTGGTGG CGGACCGGTT CGTGCCGCTC GACGGCCTGC TCGCCGACCA CGTGACGCGG
ACCGCCGAGC AGAACCGCCT GCGCCTCGAC GACGGCAGCG AGGTCGTGCT CGCGCCCCGC
ACGGCCATCG ACGTGGATTA CGCCCTCGGC CGGCGGGCCA TCCGCCTGAT CGAGGGCGAG
GTTCTCGTGC GCGTCGCGGC GCGGTCCGCC CCGTTCCGGC TCGATGCCGG CGTCCTGAAC
CTCACGGCGG AATCCGGCAG CTTCCTGGTC GAGAAGCGCG CCGAGGTGCT GGCGGCGACC
GGCCTCCAGG GAACGGGACG GCTCGTGGTC GGGGCCGCCG CCGCGGCGAT CGGGCGCGGC
GAGCGGCTCG GCCTGGAGGA CGGCCGCCTG CGTCGGCAGG CGGTCGACGA GGTCGAGGAT
GTCACGGCCT GGCTCGACGG AGTTCTGGTG GCGAAGAACC GCTCGGTCGC CTCGATCGTC
CGCGCCCTGC GCCCCTACTT CCCCGGCGTC ATCCGCGTGG ATCCGGCCGT GGCGGAGATC
CGGGCCACCG GCGTGTTCCC GCTGCGGCAC CCGGGCGAGG CCCTCGACAT TCTGGGCGCG
TCGCTCGGCC TATCGATCAC CCGCGTGGCG CATTACTGGG TGGCTATCGG GCCGGATGCG
GCTGCGGCGA CCCGGTCCGG GTGA
 
Protein sequence
MAGSAERDEQ PVEAAIGWMV ELSSGAVTER QRRAFEAWLA ADPGHEAAWL GLQESLMPCG 
VAARQRLPPG RLTQRLLARQ PNRRAVLTGV AAALGLGAAG SLVADRFVPL DGLLADHVTR
TAEQNRLRLD DGSEVVLAPR TAIDVDYALG RRAIRLIEGE VLVRVAARSA PFRLDAGVLN
LTAESGSFLV EKRAEVLAAT GLQGTGRLVV GAAAAAIGRG ERLGLEDGRL RRQAVDEVED
VTAWLDGVLV AKNRSVASIV RALRPYFPGV IRVDPAVAEI RATGVFPLRH PGEALDILGA
SLGLSITRVA HYWVAIGPDA AAATRSG