Gene M446_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3437 
Symbol 
ID6132090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3816688 
End bp3817206 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID641643606 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001770258 
Protein GI170741603 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0331646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00375659 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAGCGT CACCGTCGCT TCGGAATGTC TCCGCGCTCG ATGGGTTGTT CCGTGAGCAC 
AGTCATTGGC TGCTGCGTTG GCTGAGCAAG CAGCGCTGGA CCGTCACTTC GCCGGAGGAT
CTCACCTCCG ACGTGTTCCT GGCGCTGCTG CAGATCCCCG ATCTCGGCGC GGTCCGTCAG
CCGCGCGCGA TGATGACCAC GATCGCTCGG CGGCTGATCT GCGACGCACG TCGGCGCGAC
GATCTCCGCC GCGCCTACGA GAACGAGCTG GCGGCCCTGC CCGAGGCGTT CGAGATTTCC
GCAGAGGAAC GCCTCATCCT TGTGCAGGCG CTCCAGGCCA TCGACGCGAT GCTCGCGGGC
CTCTCGCGGA AGGCGCGCGC GGCCTTCCTG ATGAGCCAGA TCGACGGCAT GCCCTACGCG
GAGATCGCGG CCGAACTGAA CGTCTCGGTC AGCATGGTGC GCAAATACGT TGCGCAGGGT
CTGCGCGCGG CCGTAAAAGC GCGGAACGTC GCGGGCTGA
 
Protein sequence
MGASPSLRNV SALDGLFREH SHWLLRWLSK QRWTVTSPED LTSDVFLALL QIPDLGAVRQ 
PRAMMTTIAR RLICDARRRD DLRRAYENEL AALPEAFEIS AEERLILVQA LQAIDAMLAG
LSRKARAAFL MSQIDGMPYA EIAAELNVSV SMVRKYVAQG LRAAVKARNV AG