| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3266 |
|---|
| Symbol | |
|---|
| ID | 6132129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3616867 |
|---|
| End bp | 3619833 |
|---|
| Gene Length | 2967 bp |
|---|
| Protein Length | 988 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641643453 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_001770105 |
|---|
| Protein GI | 170741450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.271284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.20027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG GCACCCAGAA CAGCAACCCG GCCGGCGGCG ACCCGCTCGC GACCCGGCCC
TCCGCGCCCC AGGATGCCGG CGGCACCGGC GGCACGCCCC AGGGCGGCGG CTCCTACTCG
CAGGGCACGA AGGCCGGCGG GCAGGCCGGG CCCGCCCCGA GCGGGACCCT GTCGCTGCGC
GACCTGCCGG CGGGCATCCC CGGCGTCGTG TTCGAGCTCG ACGGCGAGCA GGTCGAGGCG
CGCCCGGGCG AGACCCTGTG GGCGGTCGCC CAGCGGCTCG GCACCCACAT CCCGCACCTC
TGCCACAAGC CCGCCCCGGG CTACCGGCCG GACGGCAATT GCCGCGCCTG CATGGTCGAG
ATCGAGGGGG AGCGCGTGCT CGCGGCCTCG TGCAAGCGCA CGCCGGCCGT CGGCATGAAG
GTCAAGACCC AGACCGACCG GGCCGTGAAG GCCCGCGCCA TGGTGATGGA GCTCCTCGTC
GCCGATCAGC CGGAGCGCGC GACCTCGCAC GATCCGGACT CGCACTTCTG GTCGCAGGCC
GACCACGTCG GCGTGAGCGA GAGCCGCTTC CCGGCCGAGG AGCGCTGGGC GACCGACGCG
AGCCACCCGG CGATGCGGGT GAACCTCGAC GCCTGCATCC AGTGCAACCT CTGCGTCCGG
GCCTGCCGCG AAGTCCAGGT CAACGACGTG ATCGGCATGG CCTACCGCAA CGCGGACGCC
AAGGTCGTGT TCGACTTCGA CGACCCGATG GGCTCCTCGA CCTGCGTCGC CTGCGGCGAG
TGCGTCCAGG CCTGCCCGAC CGGCGCCCTG ATGCCGGCCG CCTACCTGAA CGATGCGCAG
CAGCGCGAGG TCTATCCCGA CCGCTCGGTC GACTCGCTCT GCCCCTATTG CGGCGTCGGC
TGCCAGGTCT CCTACAAGGT CAAGGACGAC CGCATCGTCT ACGCGGAGGG CAAGGACGGC
CCGGCCAACC ACAACCGGCT CTGCGTGAAG GGCCGCTTCG GCTTCGACTA CGTCCACCAC
CCCCACCGGC TGACCAAGCC CCTGATTCGC CTCGACAACG TCGCCAAGGA CGCCAACGAC
CAGGTCGATC CGGCCAATCC CTGGACCCAT TTCCGCGAGG CGAGCTGGGA GGAGGCCCTC
GCGCGCGCGG CCGGCGGCCT GAGGCGCGTG CGCGACAGCC ACGGACGCCA CGCGCTGGCG
GGCTTCGGCT CGGCCAAGGG CTCGAACGAG GAAGCCTACC TGTTCCAGAA GCTGGTGCGG
CTCGGCTTCG GCACCAACAA CGTCGACCAT TGCACCCGGC TCTGCCACGC CTCCTCGGTG
GCCGCGCTGA TGGAGGGGCT GAATTCGGGC GCCGTCTCGG CCCCGTTCTC GGCGGCGCTC
GACGCCGAGG TGATCGTCGT CATCGGCGCG AACCCGACCG TGAACCACCC GGTCGCCGCC
ACCTTCATCA AGAACGCCGT CAAGGAGCGC GGCGCCAAGC TGATCATCAT GGACCCGCGC
CGGCAGGTCC TGTCGCGCCA CGCCTATCGC CACCTCGCCT TCAAGCCGGG CACCGACGTG
GCCATGCTGA ACGCGATGCT GAACGTGATC GTCGAGGAGG GGCTCACCGA TCAGCAGTAC
ATCGCCGGCT ACACCGAGAA CTTCGACGCG CTGAAGGACC GCATCCGCGA GTTCACGCCC
GAGAAGATGG CGAAGGTGTG CGGCATCCCG GCCGAGACCC TGCGCGAGGT GGCCCGGCTC
TACGCCCGCT CGAAGGCCTC GATCATCTTC TGGGGCATGG GCGTGAGCCA GCACGTGCAC
GGCACGGACA ATTCCCGCTG CCTGATCGCG CTCGCCCTCA CCACCGGCCA GATCGGCCGG
CCCGGCACCG GCCTGCACCC CCTGCGCGGC CAGAACAACG TCCAGGGCGC CTCCGATGCC
GGCCTGATCC CGATGGTCTA TCCGGACTAC CAATCCGTCG AGAAGGCGGC GGTGCGGGAA
TTGTTCGAGG ACTTCTGGGG CCAGTCCCTC GATCCCAAGC AGGGTCTCAC CGTGGTGGAG
ATCATGCGGG CGATCCACGC CGGCAGCATC CGCGGCATGT ACGTCGAGGG TGAGAACCCG
GCGATGTCGG ATCCCGACCT CAACCACGCC CGGCAGGCGC TGGCGATGCT CGACCACCTC
GTCGTGCAGG ACCTCTTCCT GACCGAGACC GCCTTCCACG CCGATGTGGT GCTGCCGGCC
TCGGCCTTCG CCGAGAAGGC CGGCACCTTC ACCAATACCG ATCGCCGCGT GCAGATGGCC
CGCCCGGTCG TGCCGCCCCC GGGCGACGCG CGCCAGGATT GGTGGATCAT CCAGGAGATG
GCCCGGCGCC TCGGCCTGGC CTGGGATTAT GGCGGCCCGG CCGACATCTT CACCGAGATG
GCCCGGGTGA TGCCCTCGCT CAAGAACATC ACCTGGGAGC GGGTGGAGCG CGAGGGCGCC
GTCACCTACC CGGTCGACGC GCCGGACGAG CCCGGCCACG AGATCATCTT CTACGCCGGG
TTCCCGACCG AGAGCGGGCG CGCCAAGATC GTTCCGGCCG CGGTGACGCC GCCCGACGAG
GTGCCGGACA CCGAGTTCCC GATGGTCCTC TCGACCGGCC GCGTGCTGGA GCACTGGCAC
ACGGGCTCGA TGACCCGCCG CGCCGGGGTG CTCGACGCGA TCGAGCCCGA GGCGGTGGCC
TTCATGGCGC CGCGCGAACT CGGCCGGCTC GGCCTCGTGC CGGGCGACCG GATGCGCCTC
GAGACCCGCC GCGGCGCCGT CGAGGTGAAG GTGCGCTCCG ACCGCGACGT GCCGGAGGGG
ATGGTGTTCA TGCCCTTCTG CTACGCCGAG GCCGCCGCGA ACCTGCTCAC CAACCCGGCG
CTCGACCCGA TGGGCAAGAT CCCGGAGTTC AAGTTCTGCG CCGCCCGGGT GGTGCCCGTC
GTTCCGGCCT CGATCGCGGC CGAGTAG
|
|---|
| Protein sequence | MSSGTQNSNP AGGDPLATRP SAPQDAGGTG GTPQGGGSYS QGTKAGGQAG PAPSGTLSLR
DLPAGIPGVV FELDGEQVEA RPGETLWAVA QRLGTHIPHL CHKPAPGYRP DGNCRACMVE
IEGERVLAAS CKRTPAVGMK VKTQTDRAVK ARAMVMELLV ADQPERATSH DPDSHFWSQA
DHVGVSESRF PAEERWATDA SHPAMRVNLD ACIQCNLCVR ACREVQVNDV IGMAYRNADA
KVVFDFDDPM GSSTCVACGE CVQACPTGAL MPAAYLNDAQ QREVYPDRSV DSLCPYCGVG
CQVSYKVKDD RIVYAEGKDG PANHNRLCVK GRFGFDYVHH PHRLTKPLIR LDNVAKDAND
QVDPANPWTH FREASWEEAL ARAAGGLRRV RDSHGRHALA GFGSAKGSNE EAYLFQKLVR
LGFGTNNVDH CTRLCHASSV AALMEGLNSG AVSAPFSAAL DAEVIVVIGA NPTVNHPVAA
TFIKNAVKER GAKLIIMDPR RQVLSRHAYR HLAFKPGTDV AMLNAMLNVI VEEGLTDQQY
IAGYTENFDA LKDRIREFTP EKMAKVCGIP AETLREVARL YARSKASIIF WGMGVSQHVH
GTDNSRCLIA LALTTGQIGR PGTGLHPLRG QNNVQGASDA GLIPMVYPDY QSVEKAAVRE
LFEDFWGQSL DPKQGLTVVE IMRAIHAGSI RGMYVEGENP AMSDPDLNHA RQALAMLDHL
VVQDLFLTET AFHADVVLPA SAFAEKAGTF TNTDRRVQMA RPVVPPPGDA RQDWWIIQEM
ARRLGLAWDY GGPADIFTEM ARVMPSLKNI TWERVEREGA VTYPVDAPDE PGHEIIFYAG
FPTESGRAKI VPAAVTPPDE VPDTEFPMVL STGRVLEHWH TGSMTRRAGV LDAIEPEAVA
FMAPRELGRL GLVPGDRMRL ETRRGAVEVK VRSDRDVPEG MVFMPFCYAE AAANLLTNPA
LDPMGKIPEF KFCAARVVPV VPASIAAE
|
|---|
| |