Gene M446_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3162 
Symbol 
ID6132182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3500319 
End bp3501071 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content77% 
IMG OID641643350 
ProductHAD family hydrolase 
Protein accessionYP_001770002 
Protein GI170741347 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.248638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA CCGCCCACGC GCTGTTCCTC GACTTTGACG GCACCCTCGT CGACATCGCT 
CCCCGGCCCG ACGCGGTCGT CGTGCCGCCG GCGCTGCCGC CCGCCCTCGC GGCCCTGCGG
GCGCGGCTCG GCGGCGCGCT CGCCATCGTG ACCGGCCGGC CGATCGCGAC CATCGACGGG
TTCCTGGCGC CCGAGCGCTT CGACGTGGGC GGGCTGCACG GGGTGGAGAT GCGGCGGGGC
GACGCCGTCG CGGGCTGCGA GCCCGCCGCC CACCCCTCCC TGCGCGCGGG GGTCGAGGCG
CTGAAGCGGC AGGCCGCCGC ACTCGATCGG GTGCTGATCG AGGACAAGGG GTGCTCGGTG
GCGGTGCATT GGCGCCTCGC CACGCCGGGC GACGCGGACC GGGCGCAGGC GGCGGTGGAG
CGGCTGGCGG CCGATCTCGG CAGCGCCTAC CGGCTGCAGC TCGGCAAGGC GGTGGGCGAG
ATCCTGCCCG CCAGCGCCAC CAAGGGCCAC GCCATCCGGC AGTTCCAGGA GCGGCCGCCC
TATGCGGGGC GCCGCGCCGT CTTCCTCGGC GACGACCTCA CGGACGAGAA GGCCTTCGCG
ACCGTGAACG CGGATGGCGG CATCAGCGTG CGCGTCGGCG GCGGCGAGAC GATCGCGCAG
CGCCGGCTCG CCGCCCCGGA GGACGTGCGG GCGCTCGTCC TGCGCTGGGC CGAGGGCGCG
CCCGTCGATC CGGACAGCCT GCCGCGGGCG TGA
 
Protein sequence
MTDTAHALFL DFDGTLVDIA PRPDAVVVPP ALPPALAALR ARLGGALAIV TGRPIATIDG 
FLAPERFDVG GLHGVEMRRG DAVAGCEPAA HPSLRAGVEA LKRQAAALDR VLIEDKGCSV
AVHWRLATPG DADRAQAAVE RLAADLGSAY RLQLGKAVGE ILPASATKGH AIRQFQERPP
YAGRRAVFLG DDLTDEKAFA TVNADGGISV RVGGGETIAQ RRLAAPEDVR ALVLRWAEGA
PVDPDSLPRA