| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3055 |
|---|
| Symbol | |
|---|
| ID | 6135816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3380320 |
|---|
| End bp | 3382107 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641643246 |
|---|
| Product | cyclic beta-1,2-glucan ABC transporter |
|---|
| Protein accession | YP_001769900 |
|---|
| Protein GI | 170741245 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0704257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00962069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGA TGCGTCTCTA CGCGCGGGTG ATGCGCCTGC TCGGACCCGA CCTGCGCCTC
GGCGTCCTGC TCACCGTGGC CAACGTCGCG CTCGCCGCGG CGGCCTTCGC CGAGCCGGTG
CTGTTCGGCC GCATCATCGA CCGGGTCACC CGGTTGCCGG CGGGGGCCGA GGGCGCGCCG
GGCTTCGGCG AGCTGACGCT GCTCGTCGGC GCCTGGGTGG GCTTCGGCTT CTTCACCATC
GCGGCCGGGG TGCTGATCGC GCTCCACGCC GACCGCCTCG CGCATCGCCG CCGTCTCGGC
GCGATGGCCG GCTACTTCGA GCACGTCCTC GACCTGCCGC TCGCCTTCCA CTCCGCGAAC
CATTCGGGCC GGGTGCTCAA GGCCATGCTC GAGGGGACGA ACGGCATGGC CTGGCTCTGG
CTCGGCTTCT TCCGCGACCA TTGCGCCGCG CTCCTCTCGC TGACCGTGCT GCTGCCGATG
ACGCTGTTCC TGAACTGGCA GCTCGGCGCG ATCCTGCTCG TCCTCGTCGC GGCCTTCACG
GCCCTCACCG CCTTCGTGCT GCGCCGGACC GAGACCCTGC AGGGGAGGGT GGAGCAGTAC
CATTCCGGCC TCGCCGAGCA CGCCTCCGAC GCCCTCGGCA ACGTCGCGGT GATCCAGTCC
TTCACCCGCG CCAAGGCCGA GAAGGACGCG ATGCGCGGGA TCATCCGCAA CCTCCTCGAC
GCGCAGACCC CGGTCCTGTC CTGGTGGGCG CTCGCCTCGG TGGCGACCCG CGCCTCGGCC
ACCCTGACCA TGACGGCGAT CTTCGTCACC GGCCTCGCCC TGCACTTCCG CGGCCAGGCC
AGCGTCGGGG ACGTCGTCTC CTTCATGAGC CTCGCCACGC TCCTGGTCGG GCGCCTCGAC
CAGGTCGTCT CCTTCGTCAA CGGGCTGTTC ATGCAGGCGC CCAAGATGCA GGAATTCTTC
GACATCCTCG ACACGGTGCC GGCCGTCCAC GACCGCCCGG GCGCCCGCGC CGCCGGGCGC
ATCGCCGGCG CGGTCGCGTT CGAGGACGTC ACCTTCTCGT ATGACGGCCG CCGCCGCGCC
CTCGACGGGA TCAGCTTCGC GGTCGCGCCC GGCGAAACCG TCGCCCTCGT GGGCACGACC
GGCTCCGGCA AGTCGACGAC CCTGAGCCTG CTCCACCGCG CCTTCGATCC CGCGACGGGC
ACGATCCGCA TCGACGGCGA GGACATCCGC GACCTCTCGG TGGCCTCCCT GCGCCACAAT
ATCGGCGTCG TGTTCCAGGA GCCGATGCTG TTCGCCCGCT CGATCCGCGA GAACCTGCAG
GTCGGCCGCC CGGACGCCAC CGACGCCGAG ATGCTGGAGG CGCTGGAGCG GGCGCAGGCG
AGCGATTTCC TGGCCCGCCA GCCGGACGGC CTCGACACGG TGATCGGCGA GCGCGGCCGC
TCGCTCTCCG GCGGCGAGCG CCAGCGGCTG TCGATCGCCC GCGCCCTGCT CAAGGACCCG
CCGGTCCTGA TCCTGGACGA GGCGACGAGC GCCCTCGACG CCGCCACCGA GCGCAAGCTG
CAGGGCGCGC TGGACGCCGT CATGCGGGGC CGCACCACCT TCGTGATCGC CCACCGCCTC
GCCACGATCC GCAACGTCGA CCGCATCCTG GTCTTCGAGG CCGGGCGCAT CGTCGAGGCG
GGCAGCTTCG ACGAGCTGGT GGCCCTGGGC GGGCGCTTCG CGGAGCTCGC CCGCGCCCAG
TTCATGGCGG CCGAGGCGCC CTCCGACGCC CTCGCCCTGG CGGCCTGA
|
|---|
| Protein sequence | MRLMRLYARV MRLLGPDLRL GVLLTVANVA LAAAAFAEPV LFGRIIDRVT RLPAGAEGAP
GFGELTLLVG AWVGFGFFTI AAGVLIALHA DRLAHRRRLG AMAGYFEHVL DLPLAFHSAN
HSGRVLKAML EGTNGMAWLW LGFFRDHCAA LLSLTVLLPM TLFLNWQLGA ILLVLVAAFT
ALTAFVLRRT ETLQGRVEQY HSGLAEHASD ALGNVAVIQS FTRAKAEKDA MRGIIRNLLD
AQTPVLSWWA LASVATRASA TLTMTAIFVT GLALHFRGQA SVGDVVSFMS LATLLVGRLD
QVVSFVNGLF MQAPKMQEFF DILDTVPAVH DRPGARAAGR IAGAVAFEDV TFSYDGRRRA
LDGISFAVAP GETVALVGTT GSGKSTTLSL LHRAFDPATG TIRIDGEDIR DLSVASLRHN
IGVVFQEPML FARSIRENLQ VGRPDATDAE MLEALERAQA SDFLARQPDG LDTVIGERGR
SLSGGERQRL SIARALLKDP PVLILDEATS ALDAATERKL QGALDAVMRG RTTFVIAHRL
ATIRNVDRIL VFEAGRIVEA GSFDELVALG GRFAELARAQ FMAAEAPSDA LALAA
|
|---|
| |