Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2652 |
Symbol | |
ID | 6135346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 2943178 |
End bp | 2945184 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641642866 |
Product | excinuclease ABC, C subunit |
Protein accession | YP_001769525 |
Protein GI | 170740870 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.18363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA TCCCCGGGAA CGACGTACCG CTCGACGCCC TCGACCTCGA CGACGACGGC GAGGACGCCG CGGTCGATGC CCGCGACGAC GCGCCGGAGA TCGATTTCGA CCCGCAGGCC GGGGCCGGCC TCGTGGAGGC CGGCACCGAG GTGATCCGCC GCTTCTGGTC GACCCTGCCG CCCTCCCCCG GCGTCTACCG CATGCTCGAC GCCAAGGGCG ACGTGCTCTA CGTCGGCAAG GCCAAGAACC TGAAGAACCG CGTCGGCTCC TACGCCCGCG GCCAGGCCCA TTCGAACCGC ATCGCCCGGA TGATCGCCGA GACGGCCTCG ATGGAGTTCG TCACCACGGT CACCGAGACC GAGGCGCTGC TGCTCGAAGC CAACCTGATC AAGCAGCTCA AGCCCCGCTT CAACGTGCTG ATGCGGGACG ACAAGTCGCT GCCGTACATC CTGCTCACCG CCGACACCGA GGCGCCCCAG CTCGTCAAGC ACCGCGGCGC GCGGCGCCGG CCGGGCCACT ATTTCGGCCC CTTCGCCTCG GTCTGGGCGG TCAACCGCAC GGTGAACGCG CTGCAGCGGG CCTTCCTGCT GCGCTCCTGC TCGGACAGCT ACTACGAGAA CCGCAGCCGC CCCTGCCTGC TGTACCAGAT CAAGCGGTGT TCGGGTCCCT GCACCGGGGA GATCGCGCCG GCCGACTACG CGCTGCTGGC CGACGAGGCG CGCGCCTTCC TGTCGGGGAA GTCGACCAGC GTGAAGGAGC GCCTCGCCGC CGACATGCAG GCCGCCGCCG AGGCCTGGGA ATTCGAGAAG GCGGCGCGCT ACCGCGACCG CATCGCCGCG CTCGCGGCCA TCCAGGGCGT GCAGGGCGTC AACACCCAGG ACATCGAGGA GGCCGACGTC TTCGCCCTCG ACGAGCAGGC CGGGCAGTTC TGCATCGAGG TGTTCTTCTT CCGCAACTGG CAGAACTGGG GCAACCGCGC CTACTTTCCC AAGGCCGACC GCTCGATGTC GGCCTCGGAG GTGCTCGGCT CCTTCATCGG CCAGTTCTAC GACGACAAGC CGGCGCCGCG CCTGATCCTG GTCTCGCACG AGATCGAGGA CGCGGAACTG CTCGCCGCGG CGCTCTCGAC GCGGATCGAC GCCCGGGTCG AGATCCACCA GCCCAAGCGC GGCGAGCGCA AGAACCTGAT CGACTACGCG GCCCGCAACG CCCGGGAGGC CCTGGCAAGG CGGCTCGCCG ATACCGCCTC GCAGGGCAAG CTGCTGGCGG CGCTGGGCCA GGCTTTCGGC CTGCCGAGAC CGCCGCGGCG GGTCGAGGTC TACGACAATT CCCACATCAT GGGCACGAAC GCGGTCGGCG CCATGGTCGT CGCCGGGCCG ACCGGGTTCA TGAAGACCCA TTACCGGACC TTCACCATCA AGTCGCCGGA CGTGAAGCCG GGCGACGATT TCGGCATGAT GCGCGAGGTG CTGCACCGGC GCTTCGCCCG GCTGGTCAAG GAGGCGCCCC GGCAGGAGGG CGAGGCCGAG CCGGCGGATG CGGACGCCTT CCCGGCCTGG CCGGACCTCG TCCTGATCGA CGGCGGCAAG GGCCAGCTCG AGGCCGCCCG CGCCGCCTTG GCGGAGGTCG GCGTCACGGG GGTGCCCCTC GTCGGCATCG CCAAGGGGCG GGACCGGGAC GCGGGCCGCG AGACCTTCTT CGTGGAGGGT CAGCCGCCCT TCAAGCTGCC GCCCCGCGAC CCGACGCTCT ACTTCGTGCA ACGCCTGCGC GACGAGGCGC ACCGCTTCGC GATCGGGGCG CATCGGGCCA AGCGCAAGCG CGAGCTGGTG AAGAACCCGC TCGACGAGAT CCCGGGGATC GGGCCGACGC GCAAGCGCGC CCTCCTGCAC CATTTCGGCA CCGTGAAGGC CATCGAGCGC GCGGCCCTGG AGGATCTCGC CAAGACGCCG GGCGTCAACG CCGCCACGGC CCGCGCCGTC TACGACTTCT TCCACGCGAA TGCGTGA
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Protein sequence | MTRIPGNDVP LDALDLDDDG EDAAVDARDD APEIDFDPQA GAGLVEAGTE VIRRFWSTLP PSPGVYRMLD AKGDVLYVGK AKNLKNRVGS YARGQAHSNR IARMIAETAS MEFVTTVTET EALLLEANLI KQLKPRFNVL MRDDKSLPYI LLTADTEAPQ LVKHRGARRR PGHYFGPFAS VWAVNRTVNA LQRAFLLRSC SDSYYENRSR PCLLYQIKRC SGPCTGEIAP ADYALLADEA RAFLSGKSTS VKERLAADMQ AAAEAWEFEK AARYRDRIAA LAAIQGVQGV NTQDIEEADV FALDEQAGQF CIEVFFFRNW QNWGNRAYFP KADRSMSASE VLGSFIGQFY DDKPAPRLIL VSHEIEDAEL LAAALSTRID ARVEIHQPKR GERKNLIDYA ARNAREALAR RLADTASQGK LLAALGQAFG LPRPPRRVEV YDNSHIMGTN AVGAMVVAGP TGFMKTHYRT FTIKSPDVKP GDDFGMMREV LHRRFARLVK EAPRQEGEAE PADADAFPAW PDLVLIDGGK GQLEAARAAL AEVGVTGVPL VGIAKGRDRD AGRETFFVEG QPPFKLPPRD PTLYFVQRLR DEAHRFAIGA HRAKRKRELV KNPLDEIPGI GPTRKRALLH HFGTVKAIER AALEDLAKTP GVNAATARAV YDFFHANA
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