| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2491 |
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| Symbol | |
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| ID | 6129009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 2758528 |
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| End bp | 2760132 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641642710 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001769377 |
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| Protein GI | 170740722 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.743414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.128771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGTT TTTCCTCCTC GAAGCTCGTC GGGACGCTGG CGGTGATCAT CGTCGGCCTC
GCCCTCGCCA TCCCGAGCTT CTTCAGCCCC GAGCAGCGCA AGGCGTTCGT CGCCTCGGCG
CCGTCCTGGC TCACCGCCCT CGTGCCGACG CGGGCGATCG TGCTCGGCCT CGACCTCCAG
GGCGGCTCGC AGATCGTGCT GGAGGTGGAC CGGCCCGACC TCACGCGCAC CATGGCCCAG
CAGCTGCGCG ACGACGTGCG CCGGGCCCTG CGCGAGGAGG GGGTGCAGGC GGATGGCGGC
GTCCAGATCA CGCCGCGGGG CGTGCAGCTG CGCGTCAGCG ATCCGGCGGC CCGCGCCAAG
GCCCTGCCGA AGCTGCAGGC CCTGTCGCAG CCGGTGACGG ACGCGGTGCT CGGCCAGACC
GGCGCCCGCA CCCTCGAGGT GCGCGACGAG CCGAACGGCA CGATCCAGCT CACCTTCACG
GAGGCGGGCA CCAACGCCCG GGTGCGCCGG GCGGTCCAGC AGGCGATCGA GGTGGTGCGC
CGCCGCGTCG ACCTCGGCGG CACGACGGAA CCCTCGATCC AGCAGCAAGG GGCCGACCGC
ATCCTCGTCC AGGTGCCGGG CCTGCAGGAT CCCCAGCGCC TGGAGGAGCA GCTCGGCAAG
ACCGCCAAGC TCGAATTCCG CATGCTCGCC GACAGCGCGG CCGGCGACGT CGACCTGCTG
CCCTCCCGCG ATTCCAACGG CCAGAAGGTG CCGGTCGAGC GCCGCGTGAT GGCCGACGGC
GCCGACCTGA CCGACGCGCA GCCGGGCTTC GACCAGAAGA CCAACGAGCC GATCGTCAAC
TTCAAGTTCA ACCTGCGCGG CGCCCAGCGC TTCGGCCAGG CGACGAGCGA GAATGTCGGC
CGCCCGATGG CGATCGTCCT CGACAACGAG GTGGTGTCGG CGCCCCGCAT CCTGCAGCCG
ATCACCGGCG GGCAGGGCCA GATCTCGGGC CGCTTCACGG TGCAGCAGGC CAACGACCTC
TCGGTCCTGC TGCGCGCCGG TGCCCTGCCG GCCAAGCTCA ACATCATCGA GCGCCGCACC
GTCGGGCCGG GCCTCGGCCG CGACTCGATC GAGGCCGGCA AGCTCGCCAC CATCGCGGCC
ACGGTCCTGG TCGTGACCAT GATGTTCGCC TGCTACGGCG TCTTCGGTCT CTTCGCCAAC
ATCGCCCTGA TGGTCCATGT CGGCCTCATC CTGGGCCTGA TGTCGGTGCT GGAGGCGACC
ATGACGCTGC CGGGCATCGC CGGCATCGTG CTCACCATCG GCACCGCCGT CGACTCGAAC
GTGCTCATCT ACGAGCGCGT GCGCGAGGAG GTGCGGGCCG GTCGCTCGAT CCCCTCCGCC
CTGCAGGCGG GCTTCGACCG CGCCTTCGCC ACCATCGTCG ATTCGAACTC GACCATGGCG
ATCGCCGCCA TCATCCTGTT CTTCATGGGG TCGGGACCGG TCCGCGGCTT CGCGGTGGTG
TTCATCCTCG GCATCCTCAC CACCGTGATC ACCGCGGTCA CCCTGACCCG GATGATGATC
GCCGTCTGGT ATCACCGCTT CCGGCCGAAG GTGCTGCCGA TCTGA
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| Protein sequence | MLRFSSSKLV GTLAVIIVGL ALAIPSFFSP EQRKAFVASA PSWLTALVPT RAIVLGLDLQ
GGSQIVLEVD RPDLTRTMAQ QLRDDVRRAL REEGVQADGG VQITPRGVQL RVSDPAARAK
ALPKLQALSQ PVTDAVLGQT GARTLEVRDE PNGTIQLTFT EAGTNARVRR AVQQAIEVVR
RRVDLGGTTE PSIQQQGADR ILVQVPGLQD PQRLEEQLGK TAKLEFRMLA DSAAGDVDLL
PSRDSNGQKV PVERRVMADG ADLTDAQPGF DQKTNEPIVN FKFNLRGAQR FGQATSENVG
RPMAIVLDNE VVSAPRILQP ITGGQGQISG RFTVQQANDL SVLLRAGALP AKLNIIERRT
VGPGLGRDSI EAGKLATIAA TVLVVTMMFA CYGVFGLFAN IALMVHVGLI LGLMSVLEAT
MTLPGIAGIV LTIGTAVDSN VLIYERVREE VRAGRSIPSA LQAGFDRAFA TIVDSNSTMA
IAAIILFFMG SGPVRGFAVV FILGILTTVI TAVTLTRMMI AVWYHRFRPK VLPI
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