Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2381 |
Symbol | |
ID | 6130148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2649328 |
End bp | 2650779 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641642605 |
Product | type II secretion system protein E |
Protein accession | YP_001769273 |
Protein GI | 170740618 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.587547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.373771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGCA GGAGACCCGG AGCGACGGCG TCGAGGCCCG CGGCCGCGCC CGTCGCCCCT TCCCCCCAGG CGGCCACGGC GCCCGTCCTC AACGATTCCG CCGCGCCCCG GGTGGAGACG CCGCGGGCCG CGCCGATCGT GGTCGAGGCC GCCCGGTCCG AGGATTACTA CCGCACGAAG AGCATGATCT TCGGCGCGCT GATCGAGGCG ATCGACCTCG CCCAGCTCGC CCGGCTCGAG GCGGACGCCG CCCGCGAGGA GATCCGCGAC ATCGTCACGG AGATCATCGC GCTCAAGAGC GTGGTGATGT CGATCGCCGA GCAGGAGGAC CTGCTCGACG ACATCTGCAA TGACGTGCTC GGCTACGGGC CCCTGGAGCC CCTGCTCGCC CGCGACGACA TCGCGGACGT GATGGTGAAC GGCGCGAACC GCACCTACAT CGAGGTCGCC GGCAAGATCC AGCTGACGAA CGTGCGCTTC CGCGACAACC AGCAGCTGAT GAACATCTGC CAGCGCATCG TCAGCCAAGT CGGCCGCCGG GTCGACGAGG CCTCCCCGAT CTGCGACGCG CGCCTGCCCG ACGGGTCGCG CGTCAACGTG ATCGCGCCGC CGCTGGCCAT CGACGGCCCC GCCCTCACCA TCCGCAAGTT CAAGAAGGAC AAGCTCACCC TCGACCAGCT CGTCCGCTTC GGCTCCATCT CGCCCGAGGG CGCCAAGATC CTGCAGATCA TCGGACGGGT GCGCTGCAAC GTGGTGGTGT CGGGGGGCAC CGGCTCGGGC AAGACGACCC TCCTCAACTG CCTGACGCGC TACATCGACG ACGACGAGCG CATCATCACC TGCGAGGACG CGGCCGAATT GCAGCTGCAG CAGCCGCACG TGGTGCGCCT GGAGACCCGC CCGCCCAACC TGGAGGGCCA GGGCCAGATC ACCATGCGCG ACCTGATCAA GAACTGCCTG CGCATGCGGC CGGAGCGGAT CATCGTCGGC GAGGTGCGCG GACCGGAGGC CTTCGACCTG CTGCAGGCGA TGAATACCGG TCACGACGGC TCGATGGGCA CGCTGCACGC CAACTCGCCG CGGGAGTGCC TGTCGCGCAT CGAGTCGATG ATCTCGATGG GCGGCTACTC CCTGCCGTCG AAGACGATCC GCGAGATGAT CGCGGGCTCG GTCGACGTCA TCGTCCAGGC GGCGCGCCTG CGCGACGGGT CGCGGCGCAT CACCCACATC ACCGAGGTGA TGGGGATGGA GGGCGAGGTC ATCATCACCC AGGACCTGTT CGTTTACGAC GTCGTCGGCG AGGACCAGAA CGGCAAGCTG ATCGGCCGCC ACCGCTCGAC CGGGATCGGT CGCCCGCGCT TCTGGGACCG CGCACGCTAC TACGGCGAGG ACCGCGCGCT CGCCGCCGCC CTCGACGCCG CCGAGGTCCG CGACACCGGG GGCGAGGCGT GA
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Protein sequence | MFGRRPGATA SRPAAAPVAP SPQAATAPVL NDSAAPRVET PRAAPIVVEA ARSEDYYRTK SMIFGALIEA IDLAQLARLE ADAAREEIRD IVTEIIALKS VVMSIAEQED LLDDICNDVL GYGPLEPLLA RDDIADVMVN GANRTYIEVA GKIQLTNVRF RDNQQLMNIC QRIVSQVGRR VDEASPICDA RLPDGSRVNV IAPPLAIDGP ALTIRKFKKD KLTLDQLVRF GSISPEGAKI LQIIGRVRCN VVVSGGTGSG KTTLLNCLTR YIDDDERIIT CEDAAELQLQ QPHVVRLETR PPNLEGQGQI TMRDLIKNCL RMRPERIIVG EVRGPEAFDL LQAMNTGHDG SMGTLHANSP RECLSRIESM ISMGGYSLPS KTIREMIAGS VDVIVQAARL RDGSRRITHI TEVMGMEGEV IITQDLFVYD VVGEDQNGKL IGRHRSTGIG RPRFWDRARY YGEDRALAAA LDAAEVRDTG GEA
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