Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2257 |
Symbol | |
ID | 6129254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2513822 |
End bp | 2515333 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641642483 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001769151 |
Protein GI | 170740496 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.53676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00629046 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTGGCG TTCGCGGCAC CTCTGGTCGT TCCCTTCCCG CCCTGATCGC CGCCGCGGCC GTCCTGACCG CCATGACGCA TCCGGCGGAT GCCCGCCGAC GCGGGCATCA TCACGGCGGC GGCGGGGGCT ACAACCCGCC CTTCGCCGCG ATGGTGGTGG ACGTGAAGAG CGGCCGCGTG CTCCACGCGG TGAACGAGGA CGCCCTGCGC CACCCCGCCT CGATCACCAA GGTGATGACG CTCTACCTGC TGTTCGAGCA GCTGGAGCGG GGCAAGATGT CCCTCGACAC GCCCCTCGAG ATCTCGGCGA ACGCCGCCCG GCAGGCGCCC TCGAAGCTCG GCCTGCGCCC CGGATCGACC ATCACGGTCG AGGAGGCGAT CAAGGCGCTG GTCACGAAAT CGGCCAACGA CGTCGCCTGC GCGATCGGCG AGAACATCGC GGGCTCCGAG GGCGCCTTCG CCGAGATGAT GACCCGCAAG GCGCACGCCC TCGGCATGTC GCGGACCCAC TACGCCAATG CCTCGGGCCT GCCCGACAGC GACCAGATCA CGACGGCGCG GGACCTCACG GTCCTGGCGC GGGCGATCCA GGACCGCTTC CCGCGCTATT ACCGCTACTT CCAGACCCGC TCCTTCGCCT TCCGCGGCCG GGTCATCGGC AACCACAACC ACCTGCTCGG CCGCGTCGAG GGGGTCGACG GCATCAAGAC CGGCTACACG CGGGATTCCG GCTTCAACCT GATGACCTCG GCCCGGCTCG CCGACCGCCA CATCGTGGCA GTGGTGCTCG GCGGCAAGTC GGTGGCGAGC CGCGACGCGA TCATGACCCG CCTCGTCCAG GGCAACCTGC CGAAGGCCTA TGCGGGGGCG CGCACGACCC CGCCGGTGAC CGAACTCGCC GAGCGCTCGC GACCGGCCGT GGTGGCGGAG CGCTCGGCCA CGACCCGCAC CCTCGTCGCG GCGGCGGACG ACGACGACGA GGGCGTGGAG ACGACGAATT CCACCACCCG CGCCGGCCCC TCCCCCGAGA CGTCCCCGGC CTCCCGCGAC ACCGCGACCC CGTCCGGGGG CAAGTGGCGG GCGGGCCAGG GCCTCCCCTC CTCCGCCCAG GCCTACGCGC CCGCCTCCGA CCCCGCCTTC CCGGCCCCGG GCGGCAAGTA CGCGGCGCGC CTGCCCTCGG CCGAGCCCGG CGAGGCGCGG GCACCGGCGC CGCCCGCCCG CGGCGAGGCG CAGGCCGCCA AGCCCGCCGC CAAGCCCGTC TCGGTGACGC CCTGGGTGAT CCAGCTCGGC GCCATGGACG ACGAGGGCAA GGCGAAGTCG ATGCTGTCCG AGGCCCGCCA GCGCAGCGGC GGAGTGCTCG CCAAGGCCGC GCCCTTCACC GAGCGGGTGA CCCACGGCGG CACCACCCTG TTCCGCGCCC GCTTCTCCGG CTTCAGCGAG GCCGAGAGCG CCCAGGACGC CTGCCGCGCG CTGAAGCGCA ACGGCTTCAC CTGCTTCGCG ACCCGCAGCT GA
|
Protein sequence | MRGVRGTSGR SLPALIAAAA VLTAMTHPAD ARRRGHHHGG GGGYNPPFAA MVVDVKSGRV LHAVNEDALR HPASITKVMT LYLLFEQLER GKMSLDTPLE ISANAARQAP SKLGLRPGST ITVEEAIKAL VTKSANDVAC AIGENIAGSE GAFAEMMTRK AHALGMSRTH YANASGLPDS DQITTARDLT VLARAIQDRF PRYYRYFQTR SFAFRGRVIG NHNHLLGRVE GVDGIKTGYT RDSGFNLMTS ARLADRHIVA VVLGGKSVAS RDAIMTRLVQ GNLPKAYAGA RTTPPVTELA ERSRPAVVAE RSATTRTLVA AADDDDEGVE TTNSTTRAGP SPETSPASRD TATPSGGKWR AGQGLPSSAQ AYAPASDPAF PAPGGKYAAR LPSAEPGEAR APAPPARGEA QAAKPAAKPV SVTPWVIQLG AMDDEGKAKS MLSEARQRSG GVLAKAAPFT ERVTHGGTTL FRARFSGFSE AESAQDACRA LKRNGFTCFA TRS
|
| |