Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2182 |
Symbol | |
ID | 6135264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2429316 |
End bp | 2430872 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641642409 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_001769077 |
Protein GI | 170740422 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0296118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.759233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTGT TGCAACGGCT CGAGATGCGT CAGGGCCAAG CCCTGGTGAT GACGCCGCAG CTCCTGCAGG CGATCAAGCT CTTGCAGCTC TCGCATCTCG ACCTCGCGGC CTACGTGGAT GCGGAGCTGG AGCGCAACCC GCTGCTGGAG AGGGCCGAGG CCGAGGAGCC GCGCGGCGAG GCCGCGGAGG CGCCGGTTCC GGAGGCCTAT GACGGCGAGG GCGGCGGCGA GGGCGGATTC GAGGCCGGCG AGGCGGCGGA GCCGTGGCTC TCGCAGGACC TCAATCCCAG CCGCGCCGAC ATCGAGAGCG ATCTCGGCAC CCATCTCGAC AACGTCTTCC CGGATGACGG CCCGACGGTC CGCGAGCAGC CGGTGGGCGA CACCCTCTCG CTCACCCCCG CGCCCTGGGG CAGCACGGGC GGCAGCTTCG ACGGCGAGGC GCCGGATTTC GAGGCGACCC TCACCACCGA ATCCTCGCTC CGCGACCACC TGTCGGCCCA GCTCGACCTC GCCACCCGCG ATCCGGTCGA GCGCCTGGTC GGCGGGTTCC TCATCGACGC CGTCGACGAG GCCGGCTACC TGCGCGAGGA CCTCGCCGCG GTGGCGGCGC GCCTCGGCGT CGGCCTGCCC CTGGTCGAGC GGGTGCTCGC CCTCGTTCAG ACCTTCGACC CGGCCGGGAT CGGCGCCCGC GACCTCGCCG AGTGCCTGAG CATCCAGCTG CGCGAGCGCG ACCGCCTCGA TCCGGCCATG CAGGCCCTGG TCTCGCGCCT CGACCTCGTC GCCAAGCGCG ACCTCGCGGC CCTGCGCCGG CTCTGCGGCG TCGACGACGA GGACCTCGCC GACATGCTGG CCGAGCTGCG CCAGCTCGAC CCCAAGCCCG GCCGCGCCTT CGGCAGCGGC CCGGTCGAGG TGCTGGTGCC GGACGTGTTC GTGCGCCCGG CGCCGGACGG CTCCTGGCTG GTGGAGCTCA ACAGCGAGGC GCTGCCGCGC GTCCTCGTCA ACCAGATCTA CTATGCCACC GTCTCGCGCG GGGCGAAGAG CGACACCGAC AAGGCCTTCC TATCGGATTG CCTCCAGACG GCCAACTGGC TGACCCGCAG CCTGGAGCAG CGCGCCCGCA CCATCCTGAA GGTGGCGAGC GAGATCGTGC GCCAGCAGGA CGGCTTCTTC CTCAACGGCG TCGCGCATCT GCGCCCGCTC AACCTCAAGA CCGTGGCGGA CGCGATCGGC ATGCACGAAT CGACCGTGTC GCGGGTCACC TCGAACAAGT CGATCGGCAC CAGCCGCGGC ACCTTCGAGA TGAAGTACTT CTTCACGGCG GCGATCCCCG GCGCGGCGGG CGCCGCCGCC CACTCCTCCG AGGCCGTGCG CCACCGCATC AAGCAGCTGA TCGACGCCGA GGCCGACGAC GTGCTGTCGG ACGACGCGCT CGTCCAGCGC CTGCGCGGCG AGGGCGTCGA CATCGCCCGC CGCACCGTGG CGAAGTACCG GGAATCCCTG CGCATCCCCT CCTCGATCGA GCGCCGCCGC GAGCGCGCCG CCCTGGCCGT GCGCTAA
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Protein sequence | MGLLQRLEMR QGQALVMTPQ LLQAIKLLQL SHLDLAAYVD AELERNPLLE RAEAEEPRGE AAEAPVPEAY DGEGGGEGGF EAGEAAEPWL SQDLNPSRAD IESDLGTHLD NVFPDDGPTV REQPVGDTLS LTPAPWGSTG GSFDGEAPDF EATLTTESSL RDHLSAQLDL ATRDPVERLV GGFLIDAVDE AGYLREDLAA VAARLGVGLP LVERVLALVQ TFDPAGIGAR DLAECLSIQL RERDRLDPAM QALVSRLDLV AKRDLAALRR LCGVDDEDLA DMLAELRQLD PKPGRAFGSG PVEVLVPDVF VRPAPDGSWL VELNSEALPR VLVNQIYYAT VSRGAKSDTD KAFLSDCLQT ANWLTRSLEQ RARTILKVAS EIVRQQDGFF LNGVAHLRPL NLKTVADAIG MHESTVSRVT SNKSIGTSRG TFEMKYFFTA AIPGAAGAAA HSSEAVRHRI KQLIDAEADD VLSDDALVQR LRGEGVDIAR RTVAKYRESL RIPSSIERRR ERAALAVR
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