Gene M446_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1829 
Symbol 
ID6133017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2055489 
End bp2056229 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID641642078 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001768747 
Protein GI170740092 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTTGT CCCCCGATGC CCCGGCGGTC CCGGCGGCGA CCGACAGCGT GCTCCTGCCC 
GAGCCGGTGC GCGACCATCT CGGTCACGCG CTGCGGGAGC TCTACGGGGC TCACCAGACG
GCGGAGCTGT CGTCCTCGCT GCAGGCGCTT CTCGACCAAC TCACCAAGGC GCTCGACGCG
CAGTCCGACG CCGATCTGCG CGCCTTCCAT GCCGGCCTGA TGAAGGCGCT GCCCTCGCTG
CGCGCCTTCG CGATCAGCAT GGCGGGGCGG ACCGCCGAGG CCGACGACCT CGTGCAGGAG
ACCGTCCTGC GCGGCTGGCA GAACCGCGAG CGCTTCACGC CGGGCACCAA CCTCGACGCG
TGGCTGTTCA CCATCATGCG CAACCACTTC TACTCGCTGC GGCGCAAGCG CTCGCGCGAG
GTGGAGGACG ACGAGGGACA GTACGCCGCG ATGCTGGCGG TGGCGCCGCG CCAGGACCAC
GGGGTGAGCC TCGTGGAGGT GCAGGAGGCG CTGTCGCGGC TGCCGCCCGA CATGCGCGAG
ACGCTGGTGC TGGTGGGCGT GCAGGAACTG ACCTACGAGC AGGTCGCCGC CATGATGGGG
GTCGCGGTCG GCACCATCAA GAGCCGCGTG AACCGCGCCC GCTCGCGGCT CGCCGCCCTG
CTCGGCTATA CGGGCCGGGA GTTGCAGGCG GACGCGATGA TCCAATCCGC CATGACGAAC
CGGGGGATGC CGCGCGGCTG A
 
Protein sequence
MLLSPDAPAV PAATDSVLLP EPVRDHLGHA LRELYGAHQT AELSSSLQAL LDQLTKALDA 
QSDADLRAFH AGLMKALPSL RAFAISMAGR TAEADDLVQE TVLRGWQNRE RFTPGTNLDA
WLFTIMRNHF YSLRRKRSRE VEDDEGQYAA MLAVAPRQDH GVSLVEVQEA LSRLPPDMRE
TLVLVGVQEL TYEQVAAMMG VAVGTIKSRV NRARSRLAAL LGYTGRELQA DAMIQSAMTN
RGMPRG