| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1809 |
|---|
| Symbol | |
|---|
| ID | 6132388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2026250 |
|---|
| End bp | 2029033 |
|---|
| Gene Length | 2784 bp |
|---|
| Protein Length | 927 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641642060 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001768729 |
|---|
| Protein GI | 170740074 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.295908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGGC GGGACGGGGA CGCCCCCGCC TTCTTGACCG GCGGCGGCGT GATGGGCGCC
GCGATGCGCG CCCGGCCCTG GTCGGGATCG GTGCTCGGCG AGCCCTCGAC CTGGCCGCAA
TGCCTGAGGT CGGCGGTCGG CCTGATGCTC GGCTCGCGCT TCCCGATGTT CGTCGCCTTC
GGGCCGGACC TCGGCTTCCT CTACAACGAC GCCTACGCGG AGATCCTCGG CGACAAGCAC
CCGGCCGCGC TCGGTCGCCG CTTCCGCGAC ATCTGGACGG AGATCTGGGC CGAGATCGAA
CCCCTGATCG CGGCGGCGCT CGCCGGCGAG GCGACCTGGT CCGAGAACCT GCCGCTGGTC
ATGAACCGGC GCGGCCACGA CGAGCAGACT TGGTTCACCT TCTCGTACTC GCCCCTGCGC
GACGACGAGG GCGCGGTCGT GGGCATGTTC TGCGCCTGCA CGGAGACGAC CGGCCAGGTG
CTGGCGGAGG AGCGGCTGCG CGCCAGCGAG GAGTTCAACC GCCGCATCCT CGCGAGCTCG
GCCGATTGCA TCAAGGTGCT CAGCCTCGAC GGCCGCCTCG AATTCATGAG CGAGGGCGGC
ATGTGCGCGA TGGCGGTCGA GGATTTCGGC CTGATCCGCG GCGCCCACTG GCCCGATTTC
TGGCAGGGCG AGGGGCGCGA CCAGGCCCGT GCGGCGATCC GGGAGGCCCG GCGCGGCGGC
ACGGGCCGCT TCCAGGGCCT CGCCACCACC GCCAGGGGCA CGCCGCGGTG GTGGGACGTG
ATCGTCACCT CGATCGACGG GCCCGACGAC CGGCCGGAGA AGCTCCTCGC GGTGTCCCGG
GACGTGACAG CGACGAGGGA GGCGGAGGAG CGCGTGCGCG AGAGCGAGGC GCGCTTCCGG
CAAATGGCGG ACGCCGTGCC CCAGATCGTC TGGATCACCG ATGCCGAGGG CCGCACCGAG
TTCTTCAACA GGCAGTGGAC GGCCTATACG GGCGCGCCCT ACGCGCCGAC GACGGCCGCC
GCGGTGGCCG CCGCCCACGT CCACCCGGAC GACGCGCAGG CCACGATGGC GGCCTTCGGC
GAGGCCAGGC GATCGGGCGG CACCTTCCTG GTCGAGCACC GCATCCGCTC GGCCGCCGGG
ACCTACCGCT GGTTCCTGGT CCGCGCCGAG CCCTCCCGCG ATCCGGTCAC CGGCGAGGTG
GTGCGCTGGT TCGGGGCCTC GGTCGACATC CACGACCGCA AGCTCGCCGA GGAGGCGCTG
CTGGCGCTCA ACGCCGACCT CGAGCGGGAG GTGGTCGCGC GCACCCGCGA GCGCGGCCTG
ATCTGGCAGC TCAGCCTCGA CCTGCTCTCG GTCATCGACA TTGACACGGC GGCCTTCGCC
GCGGCCAACC CGGCCTGGAC GGCGGCGCTC GGCTGGCCGA CGAGCGAGAT CGAGGGACGG
CCCTACGCCG AACTCGTGCA CCCGGACGAT GTCGGCGCGA GCCTCGCGGC CTTCGACGCC
ATCCGGCAGG GCAGCCCCGT CCTGCACTTC GAGAACCGCT ACCGCACCCG GGACGGCGGC
TGGCGCTGGC TGTCCTGGGT GGCCGTGCCG GAGGGCGGCA AGCTCTACTC GGTCACCCGC
GACGTCACCG AGGAGAAGGA GCGCCGGGCC GAGCTGGAGG CCGCACAGGA GGCGCTGCGC
CAGTCGCAGA AGATGGAGGC GATGGGCCAG CTCACCGGCG GCGTCGCGCA CGACTTCAAC
AACCTCCTCA CCCCGATCGT CGGCTCCCTC GACATGCTCC AGCGCAGGGG CCTGGGCGGC
GAACGGGAGC AGCGCCTCAT CGCGGGCGCC ATGCAGTCGG CCGAGCGGGC GAAGACGCTG
GTGCAGCGGC TCCTCGCCTT CGCGCGGCGG CAGCCGCTGC AGCCGATCCC CGTCGACGTC
GCCAAGCTGG TGACCGGGAT GGGCGACCTC GTGGCGAGCA CGATGGGCCC GCAGATCAGG
GTCGCCGTCG ACGCGCCCGA CGCCCTGCCG CCCGCGAAGG CCGACCCGAA CCAGATCGAG
ATGGCGCTCC TGAACCTCTG CGTGAACGCG CGGGACGCCA TGCCGGAGGG CGGCACGCTG
CGGATCTCGG CCCGCGCGGA GACGGTCGGG CCCGGTCACC GCACCACGCT CCGGCCGGGC
CCCTACATCC GCCTGTCGGT CGCCGACAGC GGGACCGGCA TGGACGAGGC GACGCTCGCG
CGGGCGGTCG AGCCCTTCTT CTCCACCAAG GGCGTTGGCA AGGGCACGGG GCTCGGCCTC
TCGATGGTGC ACGGCCTCGC CTCCCAGCTC AGCGGCGCGC TCACCATCCA GAGCCGGCCG
GGGCTCGGCA CCAATGTCGA GCTCTGGCTG CCGCGGAGCG ACGCGGCCCC GGACCTGGCC
GAGCCCGCGC CGCAGCCTTC CGCGGCGGCG TCCCCGCGCG GGACCGCGCT CCTGGTCGAC
GACGAGGACC TCGTGCGCAT GAGCACGGCG GACATGCTGG GCGACCTCGG CTACGCGGTG
ATCGAGGCCG CATCGGGCGA GGAGGCGATG CGCCTCGTCC GCGGCGGCGA GCGCTTCGAC
CTGCTCGTGA CCGACCACCT GATGCCGGGC ATCACCGGGA CCGAACTCGC CCGGGCGCTC
CGGCACGCGA GGCCTGGCCT GCCCGTGCTC CTGGTCTCGG GCTACGCGGA GAGCGACGGC
GTCGCGGCCG ACCTGCCGCG GCTCACCAAG CCGTTCCGCA AGAACGAACT CGCCGCGCGC
CTCGCCCAGC TGGCGACGCC CTGA
|
|---|
| Protein sequence | MPGRDGDAPA FLTGGGVMGA AMRARPWSGS VLGEPSTWPQ CLRSAVGLML GSRFPMFVAF
GPDLGFLYND AYAEILGDKH PAALGRRFRD IWTEIWAEIE PLIAAALAGE ATWSENLPLV
MNRRGHDEQT WFTFSYSPLR DDEGAVVGMF CACTETTGQV LAEERLRASE EFNRRILASS
ADCIKVLSLD GRLEFMSEGG MCAMAVEDFG LIRGAHWPDF WQGEGRDQAR AAIREARRGG
TGRFQGLATT ARGTPRWWDV IVTSIDGPDD RPEKLLAVSR DVTATREAEE RVRESEARFR
QMADAVPQIV WITDAEGRTE FFNRQWTAYT GAPYAPTTAA AVAAAHVHPD DAQATMAAFG
EARRSGGTFL VEHRIRSAAG TYRWFLVRAE PSRDPVTGEV VRWFGASVDI HDRKLAEEAL
LALNADLERE VVARTRERGL IWQLSLDLLS VIDIDTAAFA AANPAWTAAL GWPTSEIEGR
PYAELVHPDD VGASLAAFDA IRQGSPVLHF ENRYRTRDGG WRWLSWVAVP EGGKLYSVTR
DVTEEKERRA ELEAAQEALR QSQKMEAMGQ LTGGVAHDFN NLLTPIVGSL DMLQRRGLGG
EREQRLIAGA MQSAERAKTL VQRLLAFARR QPLQPIPVDV AKLVTGMGDL VASTMGPQIR
VAVDAPDALP PAKADPNQIE MALLNLCVNA RDAMPEGGTL RISARAETVG PGHRTTLRPG
PYIRLSVADS GTGMDEATLA RAVEPFFSTK GVGKGTGLGL SMVHGLASQL SGALTIQSRP
GLGTNVELWL PRSDAAPDLA EPAPQPSAAA SPRGTALLVD DEDLVRMSTA DMLGDLGYAV
IEAASGEEAM RLVRGGERFD LLVTDHLMPG ITGTELARAL RHARPGLPVL LVSGYAESDG
VAADLPRLTK PFRKNELAAR LAQLATP
|
|---|
| |