Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1780 |
Symbol | |
ID | 6134363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 1994890 |
End bp | 1996374 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641642033 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001768702 |
Protein GI | 170740047 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.459436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0080021 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCCTGA CGACCGGCCG CCGTGCCGAA GGGCCGTCCG CGGGTCTCGT CTCCCTCTGC CTCGCGGCGC TGCTCGGCGG CGGCCTCTGC CTCACGGTGG CGTTCCTCTC CGCGCCCGCC CTCGGCGTGG TGGCGGGGCT CGCCCTGGTC TGGAGCATCG CCGCCAGCGT GGCGGCGGGT CTCGGCTGGC GGGCCGCCCG GCGCGCCGCC GCGCAGGCCG AGAAGCTCTC GGGCGAGGTC GATCTCCTGT CGCGGCGCCT GCTCGCCCTG GAGCAGCGCC CGGCCCCGGC GGCGGGGCCG GAGCCGCCGC GTCAGCAAAG CGGCGAGGCC GATCTCTCGG AACTGACCGC CGAGATCGGG CTCCTCGGCA GCATCGTGCG CGAGATCGCC GTGACGGTGG CGGCGCAGGA CCAGGAGATC GCGCGGCTGA AGCAGCCGCC CCCGCCGCCG CCTCCCGCCT CCAAGAATCC CATTCCCGAG CGTCCCGCTC CCGAGGCTCC TCGCCCGCCC GCTTCCGAGC CGGGGATCCG CCCGCGGAGC GAGGCTCCGC CGCGGGGTCG GTCCCTGCCG GGGGAGCAGG CCGCGCCGCG CCCCTTCGTG CCGGAGCCCG CCCTGCCGCG CCCGGTCGCC TCCGGCGCCG AGGCGCGGCG GCGCGAGCAG GCGATCCTGG AGGCCCTGAC CCAGGGCGGG CTCGAAGTGC ATCTCCAGCC CATCGTCAGC CTCCCCCAGC GCAAGGTGGC CTTCTACGAG GCGCTCACCC GCCTCAGCCT CGGGGAGGCG CGGCTCACCC CGGCGGAGTT CATCCCGACG CTCGAACGCC ACGGCCGCAC CACGGAACTC GACCGGCTGA TGCTCGCGCG CGTGACGGCG ATCGGCCGCC AGCTGGCGGC GCGGGGCAGC ACCGCCGCGG TGGCCTACGC GCTCTCGCCG AGTTCGCTGT TCGAGCCCGG CTTCCTGCGC GGGCTCGGCC GGCTGATCGA GGCGCATCCC GAACTCGCCG GGCGGATGAT CCTGGCGCTG CCCCAGCGCA GCCTGCGCAG CCTCGACGGC GAGCAGAGCG CGGCGCTCGC CGCCCTGCGC GGGCGGATCC CCCTCGCCCT CGACCGGGCG GGGGATCTGC GCTTCGACGG TTCCGCCCTC GCGGCGCTCG GCATCGCCTA CGCCAAGGTG CCGGCGGACC TGCTGCTCGG CCGGCGCGGC GGCACCCCGG AGGTCGCGCC GGAGGACCTC GCCGCGGCCC TGGCGCGCGC GGGCATCCGG CTGATCGCCG AGGCCGTGGA GCGCGACGCC GACGTGCCCG ACCTGATCGA CCTCGACCTG CCGCTGGCCC AGGGGGACGT CTTCGCCGCG CCCCGGATCG TGCGCCCCGA GGTGCTCCAG CCGCCGGAGG CGCCCCCCGA GCCGGAGCCG CCCGACCCCG CGCCGCCGGC CGAGGACCCG CCGGTGCGGC GCTCCTTCCG GGATTTCCTG CGCCGGGCGG TGTAG
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Protein sequence | MALTTGRRAE GPSAGLVSLC LAALLGGGLC LTVAFLSAPA LGVVAGLALV WSIAASVAAG LGWRAARRAA AQAEKLSGEV DLLSRRLLAL EQRPAPAAGP EPPRQQSGEA DLSELTAEIG LLGSIVREIA VTVAAQDQEI ARLKQPPPPP PPASKNPIPE RPAPEAPRPP ASEPGIRPRS EAPPRGRSLP GEQAAPRPFV PEPALPRPVA SGAEARRREQ AILEALTQGG LEVHLQPIVS LPQRKVAFYE ALTRLSLGEA RLTPAEFIPT LERHGRTTEL DRLMLARVTA IGRQLAARGS TAAVAYALSP SSLFEPGFLR GLGRLIEAHP ELAGRMILAL PQRSLRSLDG EQSAALAALR GRIPLALDRA GDLRFDGSAL AALGIAYAKV PADLLLGRRG GTPEVAPEDL AAALARAGIR LIAEAVERDA DVPDLIDLDL PLAQGDVFAA PRIVRPEVLQ PPEAPPEPEP PDPAPPAEDP PVRRSFRDFL RRAV
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