Gene M446_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1778 
Symbol 
ID6134229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1992409 
End bp1994229 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content75% 
IMG OID641642031 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001768700 
Protein GI170740045 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.415214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0072817 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCGTATCA ACAAGGCCTT GGCGACCCTG ATCGACGCCC GCCTCGCGGG CCTCGTGCAC 
GACTCCGTCT CGGAGGAATC CGGCGAGCGG GGCCGCCACG AGCGTTTCCT GATCTCGCGC
CTGGCGACCG GCGCGGTGAG CATGGCGCTG CTGCCCCCCT ACCTGCTCTG GCGGGGGGTG
CCGTCGCTGC TGGAGGCGGG CGTCGCCGTC TGCCTCATGC TGCCGGTGGT GGCGGCCTTC
CTGCTCGCCC GGACGGGGCG GCTGACCCCG GCGCACGCCC TCTCGGCCGC GGCCCATGCG
GGCTTCATCG TCTGCCTCGC GCAGCTCACC GGGGGTCCGG TCTCGGCCGC GACGCTCTGG
CTCGCGCTGA TCCCGATCGA GGCGCTGATG GCCGGCACCC ACCGGGCCGC CATCGCGGCG
GCCGGGATCG CGGCGGCGGC GGCGGTCGCG ATCGCCTGCC TGGACCCGCC CGCGGAACCC
CCGCTCGCCT GGTCGGCGGC CCTGGCGATG CCGGTCTTCG CCGTCACGGC GATCTGCCAC
GTGCTCTCCC TGGCGCTCGA ATTCCGGCGT CGCGAGGGCA GCTGGAACGA CCGCCTCCAG
CAGGCCTCGG CGCGCAACGC CCTGCTCCTC GACGTCATCG ACGACCTCGT GACCTGGCAC
GACCGCGGCG GCGGCGTGGT CCAGGCGAGC CGCGGGGCGC TGCGCCTGGC CGGGGCGGCG
CCGCAGACGC TCCTCGGCCG CGGCCTCCTC GGCCGGATCC ACGTCCAGGA CCGGCCGGCC
TTCCTGAAGG CGATCAGCGA CGCGGGCAGC CTCGACGGGC CGGTGACCGT GCAGGTGCGC
CTGCACACCG ACCTCGCAGC CTCGGGCGAG GCGGGCCGGG TGATCTGGGT CGAGATGCGC
GCCCACCGGG TGCCGCCCGG CGCGCGGGCC GGCGCCCCCC ACCACAGCGC CGTGGTGGCG
GTGACCCGCG ACGTGTCCGA GCAGCGCCGC CACGCGGAGG AGATGGAGCA GGCCCGCGCC
GAGGCGGAGC GCGCCGACGC GGTCAAGAGC CGCTTCCTCG CGGTGGTCAG CCACGAGTTG
CGCACCCCGC TCAACGCGAT CATCGGCTTC TCCGAGATGC TCTCGGCCGA GGCCAACCTC
GCCCTGCCGC CGGAGCGGCA GCGCGAATAC GCGGCGATCA TCCACGGCTC CGGCCGGCAC
CTCCTGGAGG TCGTGAACGC GCTCCTCGAC CTCACCAAGA TCCAGAGCGG CAGCTTCGAC
TTCGCGCCGG AACCGTTCGA CCTGCGCGCC CTGGTCAACG GCTGCTGCGA CCTGATGCAG
CTGCGCGCCG ACCAGGGCGG CATCGAGCTG ATGCGCGACG TCCCCCGCGA CCTGCCGGAA
CTCACGGCGG ATCCGCGCGC CTGCCGCCAG ATGCTGATCA ACCTGCTGTC GAACGCCGTG
AAGTTCACGC CGCGGGGCGG GCGGATCACG GTCGCGGTGA GGGCGATCTA CGACCGCATC
GAGATGTCCG TCACCGATAC CGGCGTCGGC ATCGCGGAGG CCGACCTGCC GCGGCTGGGC
GATCCGTTCT TCCAGGCGGG CGACTCGGCG GCCTATGCGC GGATGCACGA GGGCACGGGG
CTCGGGCTCT CCGTGGTGCG GGGCCTCGTC GGCCTGCACG ACGGCGAACT GCTGCTCGAG
AGCTCGGTCG CCCGCGGCAC CCGCGTGGTG GTGGTGCTGC CGCTCGACTG CCGCGGCGGG
CCGCGCAGCG GCGGCCCGGT GCCGATCCGC ACCGCCCCCC TCGCCGAGCC CGGCGCCGTG
CCGCTGCTGC GCGCGAGCTG A
 
Protein sequence
MRINKALATL IDARLAGLVH DSVSEESGER GRHERFLISR LATGAVSMAL LPPYLLWRGV 
PSLLEAGVAV CLMLPVVAAF LLARTGRLTP AHALSAAAHA GFIVCLAQLT GGPVSAATLW
LALIPIEALM AGTHRAAIAA AGIAAAAAVA IACLDPPAEP PLAWSAALAM PVFAVTAICH
VLSLALEFRR REGSWNDRLQ QASARNALLL DVIDDLVTWH DRGGGVVQAS RGALRLAGAA
PQTLLGRGLL GRIHVQDRPA FLKAISDAGS LDGPVTVQVR LHTDLAASGE AGRVIWVEMR
AHRVPPGARA GAPHHSAVVA VTRDVSEQRR HAEEMEQARA EAERADAVKS RFLAVVSHEL
RTPLNAIIGF SEMLSAEANL ALPPERQREY AAIIHGSGRH LLEVVNALLD LTKIQSGSFD
FAPEPFDLRA LVNGCCDLMQ LRADQGGIEL MRDVPRDLPE LTADPRACRQ MLINLLSNAV
KFTPRGGRIT VAVRAIYDRI EMSVTDTGVG IAEADLPRLG DPFFQAGDSA AYARMHEGTG
LGLSVVRGLV GLHDGELLLE SSVARGTRVV VVLPLDCRGG PRSGGPVPIR TAPLAEPGAV
PLLRAS