Gene M446_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1775 
Symbol 
ID6134226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1989740 
End bp1991146 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content76% 
IMG OID641642030 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_001768699 
Protein GI170740044 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.410369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0147653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTT CGACTGCTGC TGTGACGAGA CGCCCGGATC CGGCGTGGGG TCCGCGGCCG 
TTCGGAAGTG GGGCGGAGTC CCACCTCGAC GCGATGTGCC GCACGGCCGC GGCCCTGCTC
GGCCTGCCGG CCGCCCTGGT GTCGCGCGCG GGGGCGGAGG GCCACCGGAT CGAGGCGGCG
TGCGGGCTCC CGGTCGCGGA GGCGCCCCGG GCGGCCGCGC TCTGCGCGCA GGTCCTCCTG
GGCGACGAGG TGCTGGTGGT CGAGGATGCG GCGGAGGATC CGCGCGTCTC CGAGGCGGGC
CGGGCGCGCG GGACCTCCCT GAGGTTCTTC GCCGGAGTTC CGCTGATCCT GGCTCCGGGC
CTGCGCCTCG GGGTGCTGGC CGTGCTCGGC CCGACCCCGC GCCGCGTCTC GCCCGAGGAG
CGCGCGCGCC TCGCGGATCT CGCGGCGATC GTCGGCGCGC ATCTGCGCCT GCGCCACACC
GAGGCGGTCC TGCGCACCAG CGAGGCGCAT TTCCGGCTCC TGGCCGAGAG CGCCTCCGAC
ATGATCGTGC TCGCCGACGC GGATACGACC CGGCGCTACG TCTCGCCGGC CTCGCTCCCC
CTCCTCGGCT ACGCGCCCGA GGAACTCGTC GGCACCCGCC CGATCGACGG CGTCCACCCG
GACGACGCGG CGGGCTACCG CGCCCTGCTC GACCGCGTGA GCCGCGGCGA GGCCGACCGG
GTCGTGGGCC GGCAGCGCTA CCGGCGCAAG GACGGCCGCT TCGTCTGGGT CGAGGCGACG
TTCAGCGTGA TGCGCGAGGG CGGGACGGGC CTGCCCACCG GCTACGTGGC GGCGGTGCGC
GACATCTCGG AGCGCAAGGA GGCGGAGAGC CGGATCGCGC ATCTGGCGCT CCACGACGCG
CTCACGGGCC TGCCGAACCG CCTGCTGCTG CGCGACCGGT TGCAGCAGGA ACTGGCCCTG
GTGCAGCGCT ACGGCGGCGC CTTCGCGCTG CTCTGCCTCG ACCTCGACCA TTTCAAGGAG
GTGAACGACC GCTTCGGCCA CGCGGCCGGC GACGCGCTCC TGTGCGCCGC GGCCGAGCGG
ATCCGGCGCA TCATCCGGAC CGAGGACACG GCGGCGCGGA TCGGCGGGGA CGAGTTCGTG
ATTCTCCAGA CCCGCACGAA CCAGCCGGTC AATGCCGAGG CCATGGCCCG CCGCCTGATC
GAGGCGCTCC ACGCCCCCTT CGCCCTCGCG GGCTTTCCCC CGCTCACCGT GGGGGTGAGC
ATCGGGGTCG CCTTCGCCCC GCGCGACAGT CTCGACGGGG AGGGCCTCTA CCGGCTGGCG
GACCAGGCGC TCTACGCCGC CAAGGCGGCG GGGCGCGGCG TCGTGCGCCT CGCCCCGCAC
TCCGCCCGCG CGTGCGCCGG GGCCTGA
 
Protein sequence
MSVSTAAVTR RPDPAWGPRP FGSGAESHLD AMCRTAAALL GLPAALVSRA GAEGHRIEAA 
CGLPVAEAPR AAALCAQVLL GDEVLVVEDA AEDPRVSEAG RARGTSLRFF AGVPLILAPG
LRLGVLAVLG PTPRRVSPEE RARLADLAAI VGAHLRLRHT EAVLRTSEAH FRLLAESASD
MIVLADADTT RRYVSPASLP LLGYAPEELV GTRPIDGVHP DDAAGYRALL DRVSRGEADR
VVGRQRYRRK DGRFVWVEAT FSVMREGGTG LPTGYVAAVR DISERKEAES RIAHLALHDA
LTGLPNRLLL RDRLQQELAL VQRYGGAFAL LCLDLDHFKE VNDRFGHAAG DALLCAAAER
IRRIIRTEDT AARIGGDEFV ILQTRTNQPV NAEAMARRLI EALHAPFALA GFPPLTVGVS
IGVAFAPRDS LDGEGLYRLA DQALYAAKAA GRGVVRLAPH SARACAGA