Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1634 |
Symbol | |
ID | 6133277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 1826843 |
End bp | 1828225 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641641893 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001768562 |
Protein GI | 170739907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00700823 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCGAGC GCTGGACCCC CTCGAGCTGG CGGCGGCTGC CGATCCAGCA GGTGCCCGAC TATCCCGATG CGGTGGCGCT GGAGGCGGTC GAACGTCAGC TCGCGAGCTT TCCGCCGCTG GTTTTTGCAG GTGAGGCGCG CAAGCTGAAG CGCAGCCTCG CCACGGTGGC GGCGGGCGAG GCCTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG ACGAGCATTC GGCCGACAAC ATCCGCGACT TCTTCCGCGT CTTCCTGCAG ATGGCGCTGG TGCTCACCTT CGCGGGCGGC TCGCCGGTGG TGAAGGTCGG GCGCATCGCC GGCCAGTTCG CCAAGCCGCG CTCCTCGCCG ACCGAGACGC AGGACGGCGT CGCCCTGCCG AGCTACCGCG GCGACATCGT CAACGGCATC GGCTTCACCG CCGAGGACCG GATCCCGGAT CCGCGGCGGC AGGTCGAGGC CTACCGGCAA TCGGCGGCGA CGCTGAACCT GCTGCGCGCC TTCGCGACCG GCGGCTACGC CAACCTGGAG AACGCCCATC GCTGGATGCT GGGCTTCGTG AAGGACTCGC CGCAATCCTC GGCCTACGAG GACCTCGCCC AGCGCATGAC CGAGACCCTC GACTTCATGC GGGCGATCGG CATCAACCCG GAGACGCACC AGGAGGTGCG CCAGACCGAC TTCTACACGA GCCACGAGGC GCTGCTGCTC GGCTACGAGC AGGCCCTGAC CCGGGTCGAT TCGACGAGCG GGGATTGGTA CGCCACGTCC GGGCACATGC TCTGGATCGG GGACCGGACG CGGCAGGCGG ACCACGCCCA CATCGAGTAC GCCCGGGGCA TCAAGAACCC GGTCGGGCTC AAATGCGGCC CGTCCCTGAA GCCCGACGAC CTGATCCGGC TGATCGGCCT GCTCAATCCC GAGAACGAGC CGGGCCGCCT GACGCTGATC TGCCGCTTCG GCGCCGACAA GGTGGGCGAC CACCTGCCGG GGCTGATCCG GGCGGTCGAG CGCGAGGGCC GCAAGGTGGT GTGGTCGTGC GACCCCATGC ACGGCAACAC GGTCACGGCG AGCGGCTTCA AGACCCGGCC CTTCGAGCGG GTGATGAAGG AGATCCAGGG CTTCTTCGAC GTCCACCGGG CGGAGGGCAC CTACGCGGGC GGCATCCACC TGGAGATGAC CGGCAAGAAC GTCACCGAGT GCACGGGCGG CGCGCGCGCG CTCACGGCGG ACGACCTGCG GGACCGCTAC CACACCTATT GCGACCCGCG CCTCAACGCC GAGCAGGCGC TGGAGGTGGC GTTCCTGACC GCCGACCTCG TCAAGCGCGA GCGGCGGGAC AAGGAGCGGC CCCGGATCGA GGCCGCCGAG TAG
|
Protein sequence | MSERWTPSSW RRLPIQQVPD YPDAVALEAV ERQLASFPPL VFAGEARKLK RSLATVAAGE AFLLQGGDCA ESFDEHSADN IRDFFRVFLQ MALVLTFAGG SPVVKVGRIA GQFAKPRSSP TETQDGVALP SYRGDIVNGI GFTAEDRIPD PRRQVEAYRQ SAATLNLLRA FATGGYANLE NAHRWMLGFV KDSPQSSAYE DLAQRMTETL DFMRAIGINP ETHQEVRQTD FYTSHEALLL GYEQALTRVD STSGDWYATS GHMLWIGDRT RQADHAHIEY ARGIKNPVGL KCGPSLKPDD LIRLIGLLNP ENEPGRLTLI CRFGADKVGD HLPGLIRAVE REGRKVVWSC DPMHGNTVTA SGFKTRPFER VMKEIQGFFD VHRAEGTYAG GIHLEMTGKN VTECTGGARA LTADDLRDRY HTYCDPRLNA EQALEVAFLT ADLVKRERRD KERPRIEAAE
|
| |