| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1513 |
|---|
| Symbol | |
|---|
| ID | 6131850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 1682342 |
|---|
| End bp | 1684012 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641641782 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001768451 |
|---|
| Protein GI | 170739796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2730] Endoglucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA TGCAGCTCCT CGGTGTCAAT GTCACCAGCG GCGACACCGG CCGTCTGCCC
GGAGTGGCAG GCGTGGACTA CGTTTACCCG ACTCGGTGGG ATATCGACTA TATATCCTCA
AAAGGAATGA ATGTCATACG ACTGCCTGTT TTCTGGGAAC GCCTTCAACA CGTCCCGTTC
GGCGCCCTGG ACGAGGCGGA GATGGCACAT ATCGATGACC TCGTCAGCTA TGCGACATCC
AAAGGGATTT CCGTCGTCTT CGACCTTCAC AATTTCGGGT TCGGCTATGG CTACCCCGTG
GGCGGGCCCA TCACAACGGA CAGCACCTTG GCTGATTTTT GGGGCAGGAT CGCGAAGCGT
TACGTGTCAA ACTCAGGGAT TATATTTGGA CTTATGAATG AGCCGCAAGC TCAGCCAGCA
TCAGACTGGA TCCGGTCCGT GAATTCAGCG ATTCAGGCAA TCCGGAGCGC TGGTGCGACG
CAGGAGATCC TGGTTCCGGG CGCCTACGGT GACAGCGCAC TGTCCTGGAG TTCTACGGAC
AACGCCACCG TAGTTGGGAC AGGAGTGAAT GACCCATTAC ACAATTTTGC TTTCGAAGTC
CACATGTATT TCGACACGAA CAGCTGGGGC ACGGAACCTG GCGCGATCTC TGCGACGATT
GGGTCCGAGC GCCTCGCGGC CGTCACCGCG TGGGCGGAGG CGAACAACGC GCAGCTGTTC
CTTGGCGAGT TCGGTGTTGG AACAGATCAG ACGAGTCTGG CGGCGCTTGA CAATGCGCTT
TCCTACATGG AGCAGCACGC ACATGTTTGG CAGGGCGGTA CGTACTGGGT CGCCGGTCCG
CAGCTGCCCC ACCCATTTTA CTCCGTCGAG CCGCCGAACC CAGCCGCACA TATGTTGGCC
GAGAATGGCA GCTTCACGTT CATGGTAAAT GACTCGTCAG CGCTGGGCCA GCGCAATATA
CTCACACTGG ATATCTCTGA AGATGAATAT CAGGGCGATG CAGTGTTCAG CGTGTCAGTC
GACGGTGTGC AGATGGGTGG CATTCTAACC GCACACGCGT CTCACTCGAG CTTGCAGAGC
GAGACATTCT CGTTTGTTGG CGATTGGGGT ATCGGGCAGC ACGCGGTGAC CGTCAATTTT
CTGAACGATC TTTATGGTGG TGCGTCGACC GTAGATCGCA ATCTCTACAT TAATTACGCC
AGTTACGATA GCGTTCCCGT GACCGGATAC GATCAGCCGC AAATTGATAT CCTCCAAGAA
CACCGCGAGG AAGAACACCG CGAGGAGGTT CCATTCCCGA CCGTCTCAGC AGCGTCTTAC
ACCGACATCA GGCCTGGTGA TGACACCTTG CTTCTTGAGA TTTCCGAAGA TGCCTGGCTG
GGCAGTGCTC AGTACACGAT CGCCGTTGAT GGCCAGCAGA TCGGTGGCAA AATGACAGCT
ACAGCTTCGC ACGGCACCGG GCAGTCTGAT GTACTGCTAA TAAATGGTGA CTGGAGCGCC
GGCGTCCATA AAGTTAGCAT TGACTTTCTG AATGACAATT ACGGCGGCAC GCCGGCAGCC
GACCGAAATC TGTATCTCAA CGGAGCGACC TACAACGGGA CTGGAATTCC AGGTAGCCGA
CTCACGCTGT TTTCGAGCGG GTCGCAAGAA TTTACTTTCA TGGAGTTGTG A
|
|---|
| Protein sequence | MAAMQLLGVN VTSGDTGRLP GVAGVDYVYP TRWDIDYISS KGMNVIRLPV FWERLQHVPF
GALDEAEMAH IDDLVSYATS KGISVVFDLH NFGFGYGYPV GGPITTDSTL ADFWGRIAKR
YVSNSGIIFG LMNEPQAQPA SDWIRSVNSA IQAIRSAGAT QEILVPGAYG DSALSWSSTD
NATVVGTGVN DPLHNFAFEV HMYFDTNSWG TEPGAISATI GSERLAAVTA WAEANNAQLF
LGEFGVGTDQ TSLAALDNAL SYMEQHAHVW QGGTYWVAGP QLPHPFYSVE PPNPAAHMLA
ENGSFTFMVN DSSALGQRNI LTLDISEDEY QGDAVFSVSV DGVQMGGILT AHASHSSLQS
ETFSFVGDWG IGQHAVTVNF LNDLYGGAST VDRNLYINYA SYDSVPVTGY DQPQIDILQE
HREEEHREEV PFPTVSAASY TDIRPGDDTL LLEISEDAWL GSAQYTIAVD GQQIGGKMTA
TASHGTGQSD VLLINGDWSA GVHKVSIDFL NDNYGGTPAA DRNLYLNGAT YNGTGIPGSR
LTLFSSGSQE FTFMEL
|
|---|
| |