Gene M446_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1421 
Symbol 
ID6131493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1563303 
End bp1564514 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID641641701 
ProductUreA/short-chain binding protein of ABC transporter 
Protein accessionYP_001768371 
Protein GI170739716 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.118454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCC GTTCGTTGCG CCAGGTCCTC GCGGCCGGTT TCGCAGCCCT GCTCTCCGTC 
TCGGCCGCCG CGCAGGAGGC GGTTCCCCCC GTGAAGGTCG GCGTGCTCAG CGACATGAGC
GGCCCCTTCG CGGATCAGGC CGGCACCGGC TCGGTCGTCG CCGCCCAGCT CGCGGCCGAG
GATTTCGCCA AGGAGACCCC CGACATCAGG GTCGAGGTCG TCTCGGCCGA CCACCAGAAC
AAGCCCGATA TCGGCCTTGC CATCGCCCGC AAGTGGCTCG ACCAGGAGAG CGTCTCGACC
ATCGTCGACC TGCCGAACTC CGCCGTGGCG CTCGCCGTCG CCAACCTGAT GCGCGAGCGC
CACCGCGTCG CCCTGGCGTC GAGCGCGATG ACCTCCGACC TCACCGGCAA GGCCTGCGCG
CCGACCACCG TGCAGTGGGT CTCCGACACC TGGGCGCAGG GCTCCGCCAC CGCGCGCGCC
ATCGCCGAGC GCGGCTTCAA GTCCTGGTAC TTCCTCACGG TCGATTACGC CCTCGGCCAA
GCGCTGGAGC GCGACGCCAC GGCGGCCCTC AAGGGCATGG GCGGCAGCGT CAAGGGCTCG
ACCAAGCACC CGCTCAATGC CGGCGACTTC GCCTCGCCGC TGCTGGCCGC CCAGGGCTCG
GGCGCACAGG TGCTGGCGCT CGCCAATACC GGCGCCGACA TGATCAACGT GGTCAAGCAG
GCGGCGGAAT TCGGCCTGAT GCCCGACATG CGGGTTGCGG CCCTGTTCAT CCAGATCTCG
GACGTCCACG CGCTCGGCCT CAAGGCGGCC CAGGGCCTGC AATTCGCCAG CGCCTTCTAC
TGGGACCGCA CGGACGGCAC CCGCGCCTTC GCCAAGCGCT TCGCCGAGCG CATGAACGGC
CGCATGCCGA CCGAGAACCA CGCCGGGGTC TACTCGGCGA CGCTGGCCTA CCTGCGCGGC
GTGCGCGCCG CCGCCACCGT CGAGGGCGAG AAGGTGCTGG CGGCCCTGCG CGAGACGCCG
ATCGACGACC CGCTCTTCGG CCCGGTCACG ATCCGGCAGG ACGGGCGGGC GGTCCACGAC
CTCTTCCTGT TCGAGGTCAA GACCCCCGCC GAGTCGAAGG GGCCGTACGA CTACTACAAG
CTCCTCGCGA CGGTGCCGGG CGACAAGGCC TTCCGGCCCA TGAGCGAGGG CGGCTGCCCG
CTCGCGAAGT AG
 
Protein sequence
MSPRSLRQVL AAGFAALLSV SAAAQEAVPP VKVGVLSDMS GPFADQAGTG SVVAAQLAAE 
DFAKETPDIR VEVVSADHQN KPDIGLAIAR KWLDQESVST IVDLPNSAVA LAVANLMRER
HRVALASSAM TSDLTGKACA PTTVQWVSDT WAQGSATARA IAERGFKSWY FLTVDYALGQ
ALERDATAAL KGMGGSVKGS TKHPLNAGDF ASPLLAAQGS GAQVLALANT GADMINVVKQ
AAEFGLMPDM RVAALFIQIS DVHALGLKAA QGLQFASAFY WDRTDGTRAF AKRFAERMNG
RMPTENHAGV YSATLAYLRG VRAAATVEGE KVLAALRETP IDDPLFGPVT IRQDGRAVHD
LFLFEVKTPA ESKGPYDYYK LLATVPGDKA FRPMSEGGCP LAK