| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1411 |
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| Symbol | trmE |
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| ID | 6134809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 1551805 |
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| End bp | 1553118 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641641691 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001768361 |
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| Protein GI | 170739706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.03827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGACA CGATCTTCGC GCCGGCCTCG GGATTCGGAC GGGCCGCGGT GGCGGTGATC
CGGATCAGCG GACCGGGAGC GGCCTCATGT CTCACGGCGC TGACGGGCCA CCCCCCTCCC
CTGCCGCGGC GCCTGTCGCT GCGGCAGCTG CGCGACCCGG GGACGGGCGA GGTGCTCGAC
CGTGCCCTGG TGGTCTGGCT GCCCGGTCCC GCGACCTTCA CGGGCGAGGA CAGCGCCGAG
TTGCACCTTC ACGGCGGGGC GGCCGTCCGC GCGGCCGTGC TTCGGGTGCT CGGCCGCCTG
CCGGGCCTCG CCCCGGCCGA GCCCGGCGCC TTCACGCGGC GGGCCTTCCT CAACGGCCGC
ATGGACCTGA CCGCGGTCGA GGGTCTCGCC GACCTGATCG ATGCCGAGAC GGAAGCGCAG
CGCCGGCAGG CGATGCGGCA GCTCGACGGG GCGCTCGGCC GGCTCGTGGA GGCTTGGCGG
GACACCCTGC TCGGCGTGCT CGCCGGGGCC GAGGCCGCGC TCGACTTCTC GGACGAGGGC
GACGTGGACG AATCGGCCCT GTCGGCGTCG GGTCTCGCCG CGGCCGCGCG GGTGCGGGAC
GCGATCCTGG CGGCGCTGGC GGAGGGACGG CGGGGCGAGC GGCTGCGGGA GGGGTTCGTG
GTGGTCCTGG CCGGTCCGCC CAATGCCGGC AAATCGACGC TGCTCAACGC CCTCGCCCGG
CGGGAGGCGG CGATCGTCTC GCCGATCCCC GGCACCACGC GGGATGCGAT CGAGGTCCGC
TGCGACCTCG ACGGCCTGCC GGTGCTCCTC GTCGACACGG CCGGGCTGCG GGACGAAGGG
GCGGACCCGA TCGAGGCCGA GGGCATGGCG CGCAGCCGGC GGCGGATCGA GGAGGCGGAT
CTCGTGCTGT GGCTGGTGCC GCCCGAGGGC GGCGCCGCGG CGCCGAAGGG AGCCCTGGTC
GTGCACACCA AGCGGGATCT CGGGCGGGAT CCGGGCGGCG GCGTGGACGG GGCGCTCGCG
ATCTCGGCCC TGACCGGCGA GGGGCTCGCG ATGCTTCTCG ACCGCGTCGC GGCCGCGGCG
GGGGCCGCGC TCGGCCGTGG CGACGCCGTG GTGACGCGCG AGCGGCAGCG CCGCGCGCTC
GAGGAATGCG CGGCCCATCT CGGGCGGGCG ATCGCCGGGG CCGAGACGAT GCCGGCGGAA
CTGGTCGCCG AGGACCTGCG CCTCGCGGTG CGGGCCCTCG GGGCGGTGGC GGGCCGGGTC
GGCGTCGAGG AGATGCTGGA CCGACTGTTC TCCAGTTTCT GCATCGGGAA GTGA
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| Protein sequence | MTDTIFAPAS GFGRAAVAVI RISGPGAASC LTALTGHPPP LPRRLSLRQL RDPGTGEVLD
RALVVWLPGP ATFTGEDSAE LHLHGGAAVR AAVLRVLGRL PGLAPAEPGA FTRRAFLNGR
MDLTAVEGLA DLIDAETEAQ RRQAMRQLDG ALGRLVEAWR DTLLGVLAGA EAALDFSDEG
DVDESALSAS GLAAAARVRD AILAALAEGR RGERLREGFV VVLAGPPNAG KSTLLNALAR
REAAIVSPIP GTTRDAIEVR CDLDGLPVLL VDTAGLRDEG ADPIEAEGMA RSRRRIEEAD
LVLWLVPPEG GAAAPKGALV VHTKRDLGRD PGGGVDGALA ISALTGEGLA MLLDRVAAAA
GAALGRGDAV VTRERQRRAL EECAAHLGRA IAGAETMPAE LVAEDLRLAV RALGAVAGRV
GVEEMLDRLF SSFCIGK
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