Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1339 |
Symbol | |
ID | 6135470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 1472995 |
End bp | 1474233 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641641618 |
Product | ABC transporter substrate binding protein |
Protein accession | YP_001768289 |
Protein GI | 170739634 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.358784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.213428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCA GGAGATTGCT GCGCGCGCTC GGCGCGTGCG CGGCCGCCGT CGCGGCCGGC CCGGCGCTCG CGCAGCCGGG GCCCTTGCCG GAGCCCTTGG CGGTTCGGAT CGGGGTGCTG ACGGATCTCT CGAGTCTCTA CGCGGACACC AACGGCAGTG GCGCCGTGAC GGCGGCCCGC ATGGCGGTCG AGGATTACGA GGCGGCGGGC GGCACGGTGA GGGCCGAGGT CGTGTCCGCC GACCACCAGA ACAAGGCCGA TATCGGCTCG ACGATCACGC GGGAATGGTT CGACCGGGGC GGCGTGGACG TCGTCGTGGA CGTGCCGAAC TCGGCCGTGG CCCTCAGCGT GACGGAGCTG GCGCGTCAGA AGAACAAGGT CTTCATGAAT TCGGGTGCGT CCTCGTCCGA TTTCACGGGC AAGAACTGCA CCCCCAACAG CATTCACTGG ACCTACGACA CCTACGCGCT CGCGACCGGC ACCAGCCGGG CCGTGGTGGC CTCGGGCGGG GATTCCTGGT ACCTGCTGAC GGCGGATTAC GCGTTCGGCC ACACGATGGA GGCCGACATC CGCAAGATCC TCTCGGCCTC GGGCGCCACG GTGGTGGGCA GCGCCCGCAC GCCCCTCAAC ACCCCCGACT TCTCGTCCTT CCTGCTGCAG GCGCAGGCCT CGAAGGCCAA GGTGGTCGGG CTGGTCAACG CGGGCGGCGA CACGATCAAC GCGATCAAGC AGGCGTCCGA GTTCGGCATC GTGCAGGGCG GGCAGAAGAT CGCCGCCATG GTGCTCTACA TCACGGACGT GCACTCCCTC GGCCTCGGCG TCGCCCAGGG GCTGCAGTTC ACGGCCGCCT ATTACTGGGA TCTCAACGAC GGCACCCGGG CCTTCGCCAA GCGGTTCTCC GCGCGCATGG GCGGGCGCAT GCCGACGCAG CTCCAGGCCG GCGCCTACTC GGCGACGCTG CACTACCTCA AGGCCGTCGA GAAGGCCGGG ACGAAGACCG ACGGCAAGCG GGTCGTCGAG GTCGCCAAGA GCCTGCCGAC CGATGATCCG GCCTTCGGCA AGGGGACGAT CCGGGCCGAC GGGCGCAAGA TGCACAACAT GTACCTGTTC GAGACGAAGA CGCCGTCCGA ATCGAAGGGG CCCTGGGATT ATTACAAGCT GATCAGGACC ATCCCGGCCG AGGAGGCGTT CCGGCCGATG GGAGAGGGCG ACTGCCCGAT CGTCACCGGC TCGCGCTGA
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Protein sequence | MGIRRLLRAL GACAAAVAAG PALAQPGPLP EPLAVRIGVL TDLSSLYADT NGSGAVTAAR MAVEDYEAAG GTVRAEVVSA DHQNKADIGS TITREWFDRG GVDVVVDVPN SAVALSVTEL ARQKNKVFMN SGASSSDFTG KNCTPNSIHW TYDTYALATG TSRAVVASGG DSWYLLTADY AFGHTMEADI RKILSASGAT VVGSARTPLN TPDFSSFLLQ AQASKAKVVG LVNAGGDTIN AIKQASEFGI VQGGQKIAAM VLYITDVHSL GLGVAQGLQF TAAYYWDLND GTRAFAKRFS ARMGGRMPTQ LQAGAYSATL HYLKAVEKAG TKTDGKRVVE VAKSLPTDDP AFGKGTIRAD GRKMHNMYLF ETKTPSESKG PWDYYKLIRT IPAEEAFRPM GEGDCPIVTG SR
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