Gene M446_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1310 
Symbol 
ID6134630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1441673 
End bp1443082 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content74% 
IMG OID641641591 
ProductUbiD family decarboxylase 
Protein accessionYP_001768262 
Protein GI170739607 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.134421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC AGGCCCCTGC CCGATCCCTG CGCGACTGGC TCGGCCGCCT CGCCGAGAGC 
GGCCGGCTCA GCGTGGCGCG GCCCGGAATC GGCCTGAGGC ACGAGGCCGC CGCGGTGGCG
AACCGCCTGG ACGGGCGGAG CGCCACCCTG TTTCCCCGCC CCGGCGGGCA GGACGGCACC
ATCGTGTCGG GGCTGGTGTC GAGCCGGGCC TGGATGGCCG AGGCGCTCGG GACGAGCGAG
GACCGCCTCG TCTCGCATTT CCAGCAGGCC TGCGCGGCGC CGCTGCCCTG GCGCGAGCAG
GAGACGGGAC CGGCCCAGGA GGTGGTCCAC CGCGCCGGCA TCGACCTGCT GCGCCTCCTG
CCCGTGCCGA CGCTCAACGA GCACGACGGG GGGCCCTACA TCTCGGCCGG GCTGATGATC
TCGCGCGATC CCGAGACCGG CGCGCAGAAC GTCGCCATCC TGCGCTGCCA GATCAACGGG
CCGGACCGCA TCGGCGTGCT AGTCCTGCCC CGCCACACCG ACCACTTCTA CCGGCGGGCG
GAGGCCGCGG GCCGCGGGCT CGACGTGGCG CTGGTCGTGG GGGTCGACCC GGCCTGCCTC
CTCGCCTCGC AGGCGATCGT GCCGCTCGGG CAGGACGAGC TGGAGATCGC GGGCGCCCTC
ACGGGGGCGC CCCTGCCGGT GGTGAGGTGC CTCACCAATC CGGTGCGCGT GCCGGCCGAG
GCCGAGATCG TCATCGAGGG GCGGATCCTG CCGGAGGTGC GCGAGCCCGA GGGCCCGTTC
GGCGAGTTCC CGCAATATTA CGGCGAGCGG GCGAGGCGCC ACGTCATGCA GGTCGACGCG
GTCACCCATC GCGCCCGGCC GATCTTCCAC ATGATCGTGG GCGGCGGCCT GGAGCACCTC
CTGCTCGGCG CGATCCCGCG CGAGGCTACG ATCCTGGCCA CCCTGCGCCG CAGCTTCCCG
GGCGTCGAGG ACGTCCACCT CTCCCTCGGC GGGGTCGGGC GCTATCACCT CTACGTCAAG
CTGCGCAAGA TCCAGGAGGG CGAGGCCAAG AACGTGCTGC TCGGCGCCTT CGCGGCCCAT
TACGACATCA AGCACGCGGT GGTGGTCGAC ACGGATGTCG ACATCCACGA TCCCGGGGAG
GTCGAGTGGG CCGTCGCCAC GCGCTTCCAG GCCGACCGCG ACCTCGTGGT GGTGGCGCAG
GCGCAGGGCT CGAAGCTCGA CCCCTCGGCG CGCGACGGCG TCGGCGCCAA GATGGGGCTC
GACGCGACGG TCCCCCTGGA CGCGCCCCCC ATGAAGTTCA CGCGCATCCG CGTGCCGGGC
GAGGCCGAGG TCGACCTCGC GGCGGTGATC GCGCCGGGCG CGGATTGGCG CGACGCGGTC
GCCGATCGGC GCGACGCGGT CGCGGGCTGA
 
Protein sequence
MILQAPARSL RDWLGRLAES GRLSVARPGI GLRHEAAAVA NRLDGRSATL FPRPGGQDGT 
IVSGLVSSRA WMAEALGTSE DRLVSHFQQA CAAPLPWREQ ETGPAQEVVH RAGIDLLRLL
PVPTLNEHDG GPYISAGLMI SRDPETGAQN VAILRCQING PDRIGVLVLP RHTDHFYRRA
EAAGRGLDVA LVVGVDPACL LASQAIVPLG QDELEIAGAL TGAPLPVVRC LTNPVRVPAE
AEIVIEGRIL PEVREPEGPF GEFPQYYGER ARRHVMQVDA VTHRARPIFH MIVGGGLEHL
LLGAIPREAT ILATLRRSFP GVEDVHLSLG GVGRYHLYVK LRKIQEGEAK NVLLGAFAAH
YDIKHAVVVD TDVDIHDPGE VEWAVATRFQ ADRDLVVVAQ AQGSKLDPSA RDGVGAKMGL
DATVPLDAPP MKFTRIRVPG EAEVDLAAVI APGADWRDAV ADRRDAVAG