Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0920 |
Symbol | |
ID | 6132027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 1040516 |
End bp | 1042558 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641641229 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001767903 |
Protein GI | 170739248 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.800014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGT CTCTCTCAGG ATTTCTCGCT CTGCTGCTCA CGCTGTGGGC AGGCATGGCC GTTTCGGCCC CGGCGGAGAA GCGCGTCGCC CTCGTCATCG GCAATGCCGC CTATGACAGT TTCGGCAAGC TGGCCAATCC CGGCAACGAC GCCGAGGATC TCGCGGCCCT GCTGCGCAAA TCCGGTTTCG ACGTGATCGA CGGCCGCGAC CTCTCGCGCC GCGACATGGA CCGGAAGCTC GCGCAGTTCT CGCGGCTCGC GACGGATGCG GACACCGCCC TCGTCTACTA TGCCGGGCAC GGTCTGCAAT ATCAGAGCCA GAACTACCTG GTGCCGGTCG ACGCGCAGCT GCGGGACGGG TTCGACGTGC CGTTCGAGAC GATCTCGGTC GAGTTCGTCA TCTCGGCCCT CGACAACGCC AAGGGCGCCC GGATCCTGAT CCTCGACGCC TGCCGCGACC TGCCCCTGAA GGATGTCGGC AACAACGCCG CCAGCCACGG CCTCGCGCGG GCGGTCGGCC GCAAGGGCCT GATCCTGGCT TACGCCACCC AGGCCGACAG CGTCGCCTTC GACGGCACCG GCCGCAACAG CTTCTTCGCG GGCGCGCTGC TGAAGGCCAT GCAGGAGCCG GGCCTGGAGA TCGGCCAGGT CTTCCAGCAG GTCGCCTCGA CGGTGTCGGG CCTCACCAAC GGCCGCCAGC TGCCCGAAAT CACCCGGTCC TACCCGGGCG AGGTCTTCCT CAACCACGAG GAGACGGACA TGCAGGCCTG GTCGCGGCTG CGCCGGAGCA ACCAGCTCGC GGAGCTGCGC CAGTTCATCG CGAAGTACCC GAACAGCCTG CTGATCGACG ACGCGATGAC CCGCATCCAG CTGCTCGAGG CCCGGGCGAC GCCCGACCGC AACGAGCAGC GCGAGCCCGC CCTGCCGCGC CAGGACATGG CCAGGGACAC GGCCCGCCGC GAGGAGGAGG AGCGGCTCGC CGAGGTCGCC CGCCGCAAGC GCGAGGAGGA AGCCAAGCGC CTGGAGCAGG CCCGGCAAGA GACCACCCGT CAAGAGACCG CCCGTCTCGA AGCCGCGCGC GTCGCCGAGC AGGCCCGGCT CGCGGCCGAG GCGGCCCGGG CGCAGCAGGC CGCCAAGCTC GACGCCGAGA AGGCCGCGCC GACCGAGACG GCGCTGGCGA CGGTGCCGAC GACCTACACG GCGCTGCCGA CCGGCGAGAC GGCGCCGAAG CCGGCCGCCG CGGGCGAGGC GCCCGCCGCC GCAAGCGAGC CCGCCGCCGC GCCGGTGGTG AAGACCGCGT CCCTGTCCCA GCCCGTGGCC GAGGAGAAGG GCGTTTCCGA GCGGGTCGTG CGCGCGGTGC AGCAGCGCCT CGTCGATCTC GGCTGCTACC AGGGCCGGCC GGAATCGTCG TGGGGCAGGC AATCCTCGGA GGCGCTCGAC CAGTTCTACC GCCTGTCGCA GGCGAGCGAC CCGGCGAAGA CCCGCGCGGT CAAGATCGTG TCGCACATGC CCGATCAGGC GACGCTGGAC GTGCTCAACA CCTACAACCA GCGGATCTGC CCGGTCTCGT GCCCGACCGG GTCGGAGCCG AAGGGCGAGG TGTGCGTGAA GATCACCTGC CCGACCGGGA TGGAGCTCGA CGGGAACGAG TGCCACCCCC GCCGCAAGTC GATCCAGGCG ACGCTGCCGG CCGAGACGAC CAAGAAGGCC CCGGCCGCCG CCGCGAAGGA GACGGCCAAG CCGAAGCTGG CCAAGCGGCC CGAGCCCCAG GACGAGGAGG AGCCCGTCCA GAAGCCCAAG GCCAAGGCCA AGGCGGCGCC CGTGGTGCGG GAGACGCCGA AGGCCGCCAA GCCGGTGGTC CGCGAGGCGG CCCGCCCGGT GGCCCCGAAG GTGAAGGTGG TGGAGCCGAT CCGGGTCCGC GCGCCGGTCC CCTCCCTCGC CCGCACCCCG CGCTACGCGC CGGGCCCGGC GGCGGCCTCG GCGGCGCCGA GCTACACCCC GGCGGAGATC GGGGCCTCCC GGATGATGAG CCGGATGCCC TGA
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Protein sequence | MKRSLSGFLA LLLTLWAGMA VSAPAEKRVA LVIGNAAYDS FGKLANPGND AEDLAALLRK SGFDVIDGRD LSRRDMDRKL AQFSRLATDA DTALVYYAGH GLQYQSQNYL VPVDAQLRDG FDVPFETISV EFVISALDNA KGARILILDA CRDLPLKDVG NNAASHGLAR AVGRKGLILA YATQADSVAF DGTGRNSFFA GALLKAMQEP GLEIGQVFQQ VASTVSGLTN GRQLPEITRS YPGEVFLNHE ETDMQAWSRL RRSNQLAELR QFIAKYPNSL LIDDAMTRIQ LLEARATPDR NEQREPALPR QDMARDTARR EEEERLAEVA RRKREEEAKR LEQARQETTR QETARLEAAR VAEQARLAAE AARAQQAAKL DAEKAAPTET ALATVPTTYT ALPTGETAPK PAAAGEAPAA ASEPAAAPVV KTASLSQPVA EEKGVSERVV RAVQQRLVDL GCYQGRPESS WGRQSSEALD QFYRLSQASD PAKTRAVKIV SHMPDQATLD VLNTYNQRIC PVSCPTGSEP KGEVCVKITC PTGMELDGNE CHPRRKSIQA TLPAETTKKA PAAAAKETAK PKLAKRPEPQ DEEEPVQKPK AKAKAAPVVR ETPKAAKPVV REAARPVAPK VKVVEPIRVR APVPSLARTP RYAPGPAAAS AAPSYTPAEI GASRMMSRMP
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