Gene M446_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0884 
Symbol 
ID6129147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp995712 
End bp997172 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content73% 
IMG OID641641194 
Productmajor facilitator transporter 
Protein accessionYP_001767868 
Protein GI170739213 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAC TCCCGACGAC CCGCCGCCCC CTCGTGATCG CGGCGGTGAT GGCCTCCATG 
TTCATGGTCG CCATCGAGGC CACCATCGTG TCGACCGCGA TGCCCCAGAT CGTCGGGGAC
CTCGGCGGGC TCGCCCTCTA TTCCTGGGTG TTCTCCTCCT TCCTGCTCAC CCAGACCGCC
GCGACGGTGG TGTTCGGCAA GCTCTCGGAC GTCTACGGCC GCAAGCCCGT GATGCTCGCG
GGCATCGCCG TCTTCCTCGT CGGCTCGCTG CTCTGCGGCT TCGCCCGCTC GATGCCGGCG
ATGATCGCCT TCCGGCTGCT CCAGGGCGTC GGGGCGGGGG CGATCCAGCC GATCGCGCTC
ACCATCGTGG GCGACCTCTA CAGCGCCCAG GAGCGCGGGC GCATCCAGGG CTTCCTGGCG
AGCGTCTGGG CGACCTCCGC GGTGCTCGGG CCGCTCGCGG GCGGCTTCAT CATCGAGCAC
GCCTCCTGGG CCTGGATCTT CTGGCTCAAC ATCCCGGTCG GGCTCCTGGC GGCGACGGGC
TTCGCGACCT TCCTGCACGA GGGCGTGACC CGGGCCGAGC GCCGGATCGA CGCGGCGGGC
GCCGCCCTGT TCACGGTGGC GATCGGCGCC CTGATGGTGG CGCTCACCGA GGCCGGCACC
TCCGACAGCT GGGGCGCCAT GACGGCGGCC TGCGTCGCGC TCGTCGGCGC GACCCTGTTC
GTGCTGCAGG AGCGGCTGGC GCCCGAGCCG GTGATCGCCT TCTCGGTCTG GAGCCGCCGG
CCGATCGCCG CCTCGAACGG CTGCTCGCTC CTCGCCGGCA TGGCGCTGAT CGGCCTCACC
ACCTTCCTGC CGATGTACGT GCAGGGCGTG CTCGGCCAGA CGCCCCTGGT GGCGGGCCTC
GCCCTGACCG TGATGGTGCT CGGCTGGCCG ATCGGCGCCA CGCTCGCGGC CCGCACCCTG
ACCCGGTTCG GCCTGCGGCC GATCCTCCTC ACCGGGAGCC TGCTGCTGCC GCTCGGGGCG
AGCGTGCTCC TGACCCTCGG CCCCGGCTCC GCCCCGGGCA CGGCCGGCCT CGCTTCGCTG
GTGATGGGCT TCGGGATGGG GCTCCTCAGC ACCGCCGCCC TGGTGCTGAT CCAGGAGATC
GTGCCCTGGT CGCAGCGCGG CAGCGCCACG GCCTCGAACG TCTTCTCGCG CAACCTCGGC
AGCACGCTCG GGGCGACGCT GTTCGGGGCG GTGCTCAATC ACGGCCTCGC CCGGGCCGGA
ACCGGGGTGC ATGCCGACCA GCTCCAGCAC CTGCTCGCCA GCGGCGGCGG GGCGGGCCTG
ACCGAGATCC GCGCGACGCT GCAACAGGCG CTGCACCTCA CCTTCTGGGC GATGTTCGGC
ATCGCCGCGG CGGCGGTGCT GCTCGCGCTC CTGGTGCCGC ACGTGCCCCT CGGCCGGGCG
CGCGAGACCC CGGCCGAGTA G
 
Protein sequence
MPALPTTRRP LVIAAVMASM FMVAIEATIV STAMPQIVGD LGGLALYSWV FSSFLLTQTA 
ATVVFGKLSD VYGRKPVMLA GIAVFLVGSL LCGFARSMPA MIAFRLLQGV GAGAIQPIAL
TIVGDLYSAQ ERGRIQGFLA SVWATSAVLG PLAGGFIIEH ASWAWIFWLN IPVGLLAATG
FATFLHEGVT RAERRIDAAG AALFTVAIGA LMVALTEAGT SDSWGAMTAA CVALVGATLF
VLQERLAPEP VIAFSVWSRR PIAASNGCSL LAGMALIGLT TFLPMYVQGV LGQTPLVAGL
ALTVMVLGWP IGATLAARTL TRFGLRPILL TGSLLLPLGA SVLLTLGPGS APGTAGLASL
VMGFGMGLLS TAALVLIQEI VPWSQRGSAT ASNVFSRNLG STLGATLFGA VLNHGLARAG
TGVHADQLQH LLASGGGAGL TEIRATLQQA LHLTFWAMFG IAAAAVLLAL LVPHVPLGRA
RETPAE