Gene M446_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0626 
Symbol 
ID6132857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp728134 
End bp728781 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID641640946 
ProductSNARE associated Golgi protein 
Protein accessionYP_001767621 
Protein GI170738966 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.228359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00442875 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGCATT CCCTGCTCGG AGACCTGTCC GGCCTGATCG CGCAGCACGG TCTGTGGATC 
GTGGCGCTGA TCGTCGGCCT GGAGAGCCTG GGGCTCCCGC TTCCGGGCGA GACCTGCCTC
GTCACCGCGG CGGTCTACGC GGGGGCCACC GGCGATCTCA GCCTGCCGGG GCTCGTCGCC
TCGGCCGCCG GCGGGGCGGT GGTCGGCGAC TCGATGGGCT TCTGGATCGG GCGCCGCCTC
GGCCAGCCGG TGCTGATCCG CCACGGCCCG CGCATCGGCC TCACCCCGGA CAAGATCAAG
CTCGGGCAGT ACCTGTTCCT GCGCCACGGC GGGAAGGTGG TGTTCTTCGG CCGCTTCGTC
GCGGTGCTGC GGGTGCTGGC GGCCCTGCTC GCCGGGGCGA ACCGCATGGC CTGGCCGCGC
TTCCTCGTCT CCAACGCCAC GGGCGGCCTG CTCTGGGCGA CCGTGTTCGG CGGCGGCGCC
TACCTGTTCG GCACCCGCAT CGAGGCGGTG AGCGGTCCCC TCGGGATCGC CTTCCTGGCC
GTCGCGGTGA TCACCCTGGC TTGGCTGATC GTGACCGTGC GGCGCAACGA GGCGCGCCTG
CTGCGGGAGG CCGAGCGGGC GCTCCCGGGC CCCGTGACGC CGCGCTGA
 
Protein sequence
MLHSLLGDLS GLIAQHGLWI VALIVGLESL GLPLPGETCL VTAAVYAGAT GDLSLPGLVA 
SAAGGAVVGD SMGFWIGRRL GQPVLIRHGP RIGLTPDKIK LGQYLFLRHG GKVVFFGRFV
AVLRVLAALL AGANRMAWPR FLVSNATGGL LWATVFGGGA YLFGTRIEAV SGPLGIAFLA
VAVITLAWLI VTVRRNEARL LREAERALPG PVTPR