Gene M446_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0623 
Symbol 
ID6135112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp725709 
End bp726461 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content75% 
IMG OID641640943 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001767618 
Protein GI170738963 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.511458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00478886 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGACCCG ACCTTCTCGG CCCGCTCGCC GATGACGAGC CACCTGCCGC GGCCGCGGCC 
GCGTCCCTGT CCCTGCGGCT GCGGGCGGAC GGCTCCCTGG ACGGGCGTCC CGACCTCCCG
CCCTTCCTGC GCGACCATCT CGGCCGGCAC CTGCGGGCCT GCTACGCGGC GCTCCTGGCC
GAGGCTCAGC CGGAACCGCT CCTGGCGCTG GTGGCGCGGC TCGACGCGGC CCTCGCGGCG
GCGCGGCCGG CCTCTTCCTT CCGGGACGAA CTCGTGGCGT CCCTGCCCTG CCTGCGGGGC
TTCGCCGTGT CGCTGACGGC GAACGTGGTC CAGGCGGACG ACCTCGTGCA GGAGACGCTG
CTGCGGGCCT GGCAGAGCCA GGACCGCTTC GCGCCCGGCA CCAACCTGAA GGCGTGGCTG
TTCACGATCC TGCGCAACCA GTTCTACACT GTGGCGCGCA AGCGCCGGCG CGAGGTGGAG
GACGCGGACG GCGAGCAGGC CGCCCGCATG GTCGCGCTGC CCGACCAGGA GGACGGCATC
GAGCTGCGGG ACGTCTGGAT GCGGCTGAGC CAGCTGCCGA CCCCGCAGCG CGAGGCCCTG
CTGCTCGTGG CGGTGCAGGG GCTCAGCTAC GAATCCGCCG CCCGGATCAT GCAGTGCCAG
GTCGGCACGG TGAAGAGCCG GGTCAGCCGC GCCCGCACCG CCCTGGCCCA GGCGCTCGAG
GGCGGGGCGG CGCTCGGCGG CGCCTCGCCC TGA
 
Protein sequence
MRPDLLGPLA DDEPPAAAAA ASLSLRLRAD GSLDGRPDLP PFLRDHLGRH LRACYAALLA 
EAQPEPLLAL VARLDAALAA ARPASSFRDE LVASLPCLRG FAVSLTANVV QADDLVQETL
LRAWQSQDRF APGTNLKAWL FTILRNQFYT VARKRRREVE DADGEQAARM VALPDQEDGI
ELRDVWMRLS QLPTPQREAL LLVAVQGLSY ESAARIMQCQ VGTVKSRVSR ARTALAQALE
GGAALGGASP