Gene M446_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0563 
Symbol 
ID6130568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp672457 
End bp673815 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content72% 
IMG OID641640884 
ProductSAF domain-containing protein 
Protein accessionYP_001767559 
Protein GI170738904 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4091] Predicted homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0585583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.350969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT CCACCCTGCT GCTCGCCCGC GCCTCGGCCG GCCGGCCGGT CCGCGTCGGC 
CTGATCGGCG CCGGCAAGTT CGGCTCGATG GTGCTGGCCC AGGCCCAGCG CATCGCCGGC
CTGCACGTGG TCGGCGTCGC CGACCTCAAT GTCGGCCGCG CCCGCGACTC CCTCGCCCGC
GTCGGCTGGC CGGAGGAGCG CTACGCCGCC CCGACGCTCG GCGACGCGGT GCGCAGCGGC
CGCACCTGCG TGCTCGACGA CGCGGCGGCG CTCAGCGCCT GCGACGAGAT CGAGTGCATC
ATCGAGGCGA CCGGGCACCC GATCGCCGGC ATCCGGCACG CGCTCCAGGC CATCGACGCG
GGCAAGCACG TGGTCATGGT CAATGTCGAG GCGGACGTGC TCTGCGGGCC GCTGCTCGCC
GAGCGGGCGC GCCGCAAGGG CGTCGTCTAC AGCATGGCCT ACGGCGACCA GCCCGCCATC
ATCTGCGAGC TGGTGGATTG GGCCCGCTCC TGCGGCTTCG AACTGACCTC GGCCGGCAAG
GGCATGAATT TCGAGCCGCG CTACCGCTAC TCCACGCCCG ACACCGTCTG GGGCTTCTTC
GGCTGGTCCG AGGAGGAGGT GCGCAAGGGC GACTTCAACC CCAAGATGTA CAACTCGTTC
ACGGACGGCA CCAAGGCGGC GATCGAGATG GCGGCCGTCG CCAACGGGAC CGGACTCGAT
TGCCCGGACG ACGGCCTCGC CTTCCCGCCG ACCGGCCTGC ACGACCTCGC CCGGGTCTTC
CGCCCGGTGG CGGATGGCGG GCGCCTGCCC CGCAGCGGCC TCGTCGACAT CGCGGCGAGC
CAGGAGCCGG ACGGGCGCGA GGTGTTCAAC AACATCCGGT ACGGCGTCTT CGTCACCTTC
AAGGCGACGA GCGAGTACAC GCGGGCCTGC TTCCGCCAGT ACGGCCTCCT GACCGACCCG
TCCGGCTGGT ACGGCTCGAT GTGGCGGCCC TTCCACATGA TCGGGCTGGA GACGAGCGTG
AGCGTGCTCT CGGCGGTGCT CCGCCAGGAG CCGACCGGCT GCTCGAAGGA GTTCCGCGGG
GACGCGGTGG CGACCGCCAA GCGCGACCTC AAGGCGGGCG AGATGCTCGA CGGCGAGGGC
GGCTACGCCG TGTGGGCGAA CGCCATCCCG GCCGCGAAGA GCCTCGCCCT CGGCGCCCTG
CCGATCGGGC TCGCCCACAA CGTCGCCCTC AAGCGCCCGG TCGGCAAGGA CCAGGTGGTG
CGCTTCGACG ACGTCGAGCT CGTGAACGAC CTCGACGTGG TGGCGCTGCG GCGGCAGATG
GAGGACGCCG CCCGGCAGGC TCCCCCGAAG GCCGCCTGA
 
Protein sequence
MNLSTLLLAR ASAGRPVRVG LIGAGKFGSM VLAQAQRIAG LHVVGVADLN VGRARDSLAR 
VGWPEERYAA PTLGDAVRSG RTCVLDDAAA LSACDEIECI IEATGHPIAG IRHALQAIDA
GKHVVMVNVE ADVLCGPLLA ERARRKGVVY SMAYGDQPAI ICELVDWARS CGFELTSAGK
GMNFEPRYRY STPDTVWGFF GWSEEEVRKG DFNPKMYNSF TDGTKAAIEM AAVANGTGLD
CPDDGLAFPP TGLHDLARVF RPVADGGRLP RSGLVDIAAS QEPDGREVFN NIRYGVFVTF
KATSEYTRAC FRQYGLLTDP SGWYGSMWRP FHMIGLETSV SVLSAVLRQE PTGCSKEFRG
DAVATAKRDL KAGEMLDGEG GYAVWANAIP AAKSLALGAL PIGLAHNVAL KRPVGKDQVV
RFDDVELVND LDVVALRRQM EDAARQAPPK AA