| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0483 |
|---|
| Symbol | |
|---|
| ID | 6133283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 565467 |
|---|
| End bp | 567962 |
|---|
| Gene Length | 2496 bp |
|---|
| Protein Length | 831 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641640806 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001767481 |
|---|
| Protein GI | 170738826 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5178] U5 snRNP spliceosome subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.003873 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA GGCTCCCGCT GGCGGCGCAG CGTGCGCGCC GGCTCCTCCT CGCCACGACG
ATCCTGGGGG CGCTGCCCGC CTTCCCGGCC CTGGCCGCCC AGTTCGGCGT CGTGGTGAAT
CCGGTGCAGG ACCCGCTCTT CGCCAACCTC GCCATCCCGG ATTCCGCCCC CGCGACCGGG
ATGTGGTCGG CCGTCCAGGC GTGGCCGCTC AACGCGATCA GCACGGCCCT GCTGCCGAAC
GGCAAGCTCG TCAGCTGGGG CACGCCGGTG AACGCGCCGG GCACGCAGGA CGGCCACAGC
TTCGCGATCT GGGACCCCTA CCAGGGCTTC GCGCCGGGGA GCCACACGAT CCTGCCCGGT
GTGCTGAACG TCAACAGCTT CTGCGGCACC CAGGCCCTGC AGGCGGACGG GTCGCTGCTC
GTCTCGGGCG GCATCTTCGA CAACGGCAAC GACAAGGGCA GCGCCGTCGT CAACACGGGA
GCGACCGGGG TCTCGGCGCT CGGCGCGCGG CTCGCCGCCG ATCGCTACTA CGCCACGATG
ATCACCCTGG CGGACGGGCA GAAGCTGATC ATGGGCGGCG CCTATCCGTA CGCCAGCGGC
TGGGGCGACC CGAACGGGAG CATCGCCAAG GGCCTGATGA GCGGGATGAC GCCCGAGATC
TACAACCCGG CCACCGGCTG GCGCAGCCTG TTCGGCGCCA ACAGCCGCGA CGCGTTCGGC
CCCGACTTCA ATCGCTGGTG GTATCCCCGT GCCTGGGTCG CGCCGAACGG CAAGGTGTTC
GGGATCACCA GCGACCGGAT GTGGTTTCTC GATCCGACCG GGAACGGGTC GGTCTGGGCG
ATGCCGTTCC GCGCCCCGCA GCGGTCCGTC ACCGTCGCGA CCGACGCTCC CAATGTCGGG
CCGAACTCCA CGGCCGTGAT GTACGACGCC GGCAAGATCC TGCAGGTCGG CGGAAATTCC
TACGACAACG GGACCGGGTT CCTGGCGAGC AGCCGCGCGA CGATGATCGA CATCAACGGG
AACGCGCCCA TCGCCAACGA CATCGCACCG ATGAATATCG GCCGCTCCTG GGCCAACGCG
ACGGTTCTGC CGACCGGGAC GGTCGCCGTC ACCGGCGGCA GCAAGTCCGT CGACGCGGCC
GGGGGCGACA CGGTGCTCGA GGCCGAGCTG TGGGACCCCC GGACCGGGCA GTGGACGCTC
GGCCCGCGCG CCGCGATCTA TCGCGGCTAC CATTCGAGCG CGGTGCTCCT GCAGAGCGGC
GCCGTCCTGA CCTCGGGCGG CGGCGCGCCG GGCCCGGTCT CGAACCAGAA TTCCGAAGTC
TACTACCCGC CCTACCTGTT CACGACCGTG AACGGCAAGG CCGCCCTGGC GCCTCGGCCT
CAGATCGTCA GCCTGAACAC GGTCAGCCTG GCGCATGGGC AGAGCCTGCA ATTCGAGTTC
ACCTCCGCGA ACGGCCTCGC CCAGGTCGCG CTGCTCGGCC TCAGCCAGGG CACGCACAGC
TTCAACACCG GCCAGCGGCG CAGCCTGCTG ACCTTCACGC AGGCCGGTCA GGTCGCGACC
GTGCAGGCGC CGGCCACCCC GGCGCTCGCG CCGCCGGGCT ATTACCAGAT CGTGGCGATC
GACCAGAAGG GCGTGCCCTC GCCGGGCGTG ATCATCGCCC TCGGCAGCGG CGTCGCCCCG
CCCCCGCAGG TCGCGGCCCC GGTCGGCAAC GTCGCGCAGG GCGGCGTGAC GCCCCCGCCG
CCTCCGCCGC CTGCGCCCCC TCTGCCGCCC CCCGCGCCGC CCCCCGCGCC GCCCCCTGCA
CCGCCGCCGC CGCCTCCGGC GCCCACCGAT CTCTGGCTGC CGATCGGCAA CACGGCCAAG
CGCATCGCGG TCGGCCGCGA CGGCACCCTG GTCATGCTCA ACGCGGTCGA CGGCAGCCTC
TCGAAATACG CCCCGGACAA AACCTGGGTC AAACTGGCCG GCAACTTCAA GGATGTGGCG
GTCGTCGACG CCAACAGCAT CTACGGCATC CAGATGGACG GCGTCATCGT CCGCTTCAAC
GGGCAGACCT GGCGGCGGGT CGGCTACGGC GGCAAGACGA TCAGCGCCTC GGCCGACGGC
ACGATCGTGA TCGTGAACAT CCTCAACGAG ATCTGGAAGA AGTACGGCGA CAACGATCAG
GAGGCCTGGG GCCAGATTCC CGGAAAGGCG CAGCGCGTCG CGGCGATGAA CGCCAACAGC
TTCTGGTCGG TCGGCCTGGA CGGGGACGTG TACCGCGCCG ATCAGACGGG GAAGTGGGTC
CTCGTAGGGT CCAACGCGGT CGACATCGCC GCTTCGCCGG ACGGCAGCGT GGCGGTGATC
AACTCGGACG TCGGCGTGCT CTGGCGCAAG TTCGGCGACG ACACCGTCGA AGCCTGGGGC
TGGGTGAAGA CCCCGGGGCC GGCTCAGGCG GTCGCCGTCC CGAACGGGCA GCACGCCTTC
GTGATCGGAC GCGACGGCGT CATCTACCGC CAGTGA
|
|---|
| Protein sequence | MTRRLPLAAQ RARRLLLATT ILGALPAFPA LAAQFGVVVN PVQDPLFANL AIPDSAPATG
MWSAVQAWPL NAISTALLPN GKLVSWGTPV NAPGTQDGHS FAIWDPYQGF APGSHTILPG
VLNVNSFCGT QALQADGSLL VSGGIFDNGN DKGSAVVNTG ATGVSALGAR LAADRYYATM
ITLADGQKLI MGGAYPYASG WGDPNGSIAK GLMSGMTPEI YNPATGWRSL FGANSRDAFG
PDFNRWWYPR AWVAPNGKVF GITSDRMWFL DPTGNGSVWA MPFRAPQRSV TVATDAPNVG
PNSTAVMYDA GKILQVGGNS YDNGTGFLAS SRATMIDING NAPIANDIAP MNIGRSWANA
TVLPTGTVAV TGGSKSVDAA GGDTVLEAEL WDPRTGQWTL GPRAAIYRGY HSSAVLLQSG
AVLTSGGGAP GPVSNQNSEV YYPPYLFTTV NGKAALAPRP QIVSLNTVSL AHGQSLQFEF
TSANGLAQVA LLGLSQGTHS FNTGQRRSLL TFTQAGQVAT VQAPATPALA PPGYYQIVAI
DQKGVPSPGV IIALGSGVAP PPQVAAPVGN VAQGGVTPPP PPPPAPPLPP PAPPPAPPPA
PPPPPPAPTD LWLPIGNTAK RIAVGRDGTL VMLNAVDGSL SKYAPDKTWV KLAGNFKDVA
VVDANSIYGI QMDGVIVRFN GQTWRRVGYG GKTISASADG TIVIVNILNE IWKKYGDNDQ
EAWGQIPGKA QRVAAMNANS FWSVGLDGDV YRADQTGKWV LVGSNAVDIA ASPDGSVAVI
NSDVGVLWRK FGDDTVEAWG WVKTPGPAQA VAVPNGQHAF VIGRDGVIYR Q
|
|---|
| |