Gene M446_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0329 
Symbol 
ID6129900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp408496 
End bp409515 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID641640657 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_001767334 
Protein GI170738679 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.479734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATTC AGAAGAACTG GCAAGAGCTG ATCAAGCCGA ACAAGCTCGA AGTCGTTCCG 
GGGCACGACC CCAAGCGCGT GGCGACCGTG GTGGCCGAGC CCCTGGAGCG CGGCTTCGGC
ACGACGCTCG GCAACGCGCT GCGCCGCGTG CTGCTGTCGT CCCTGCAGGG CGCGGCCGTG
ACCTCGGTCC ACATCGACGG CGTGCTGCAC GAATTCTCCT CGATCCCGGG CGTGCGCGAG
GACGTCACCG ACATCGTCCT CAACATCAAG ACCATCGCGA TCCGCTCGAA CAGCGACGCG
CCCAAGCGCA TGACCCTGCG CAAGACCGGC CCCGGCCTGG TCACGGCGGG CGACATCAGC
ACGATCGGCG ACATCCAGAT CCTCAACCCC GACCTCGTGC TGTGCACGCT CGACGAGGGG
GCCGAGATCC GCATGGAGTT CACGGTCGCG ACCGGCAAGG GCTACGTCCC GGCCGACCGC
AACCGGCCCG AGGACGCGCC GATCGGCCTC ATCCCGGTCG ACGCGCTGTT CTCGCCCGTC
ACGAAGGTGT CCTACCGCAT CGAGAACACC CGCGAGGGCC AGGATCTCGA CAAGGACAAG
CTGACCATGA CGGTCGAGAC CAACGGCGCG GTCTCGCCCG AGGATGCGCT CGCCTACGCG
GCCCGCATCA TCCAGGACCA GCTCCAGATC TTCGTGAACT TCGAGGAGCC CCGGAAGGAG
GAGGCGGCCC CGCTCGCGCC GCAGCTGCCC TTCAACCCGG CCCTGCTCAA GAAGGTGGAC
GAGCTCGAAC TGTCGGTCCG CTCGGCGAAC TGCCTGAAGA ACGACAACAT CGTCTATATC
GGCGACCTGA TCCAGAAGAC GGAAGCCGAG ATGCTGCGGA CGCCGAATTT CGGCCGCAAG
TCTCTCAACG AGATCAAGGA AGTGCTCGCC GCGATGGGCC TGCACCTCGG CATGGACGTG
CCCGGCTGGC CGCCGGAGAA CATCGAGGAC CTCGCCAAGC GCTTCGAGGA GCACTACTGA
 
Protein sequence
MVIQKNWQEL IKPNKLEVVP GHDPKRVATV VAEPLERGFG TTLGNALRRV LLSSLQGAAV 
TSVHIDGVLH EFSSIPGVRE DVTDIVLNIK TIAIRSNSDA PKRMTLRKTG PGLVTAGDIS
TIGDIQILNP DLVLCTLDEG AEIRMEFTVA TGKGYVPADR NRPEDAPIGL IPVDALFSPV
TKVSYRIENT REGQDLDKDK LTMTVETNGA VSPEDALAYA ARIIQDQLQI FVNFEEPRKE
EAAPLAPQLP FNPALLKKVD ELELSVRSAN CLKNDNIVYI GDLIQKTEAE MLRTPNFGRK
SLNEIKEVLA AMGLHLGMDV PGWPPENIED LAKRFEEHY