| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0232 |
|---|
| Symbol | |
|---|
| ID | 6133797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 281530 |
|---|
| End bp | 282678 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641640560 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001767238 |
|---|
| Protein GI | 170738583 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03203] pimeloyl-CoA dehydrogenase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0506844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG ATCTCAGCGA GGAGCAGAGC CTCCTCAAGG ACAGCGTCGA GCGGCTCCTC
GCCGACCGCT ACGATTTCGA GGCCCGCACG CGCCACGGCC GCCACCCGGA GGGGTTCTCG
CCCGAGATGT GGCGGTCCTA CGCGGAGCAG GGCCTGCTCG CCGTGCCCTT CGCGGAGGAG
GACGGGGGCA TCGGCGGCGG GCCGGTCGAG ACCATGATCG TCATGGAGGC CTTCGGCCGC
GCCCTGGTCC TCGAACCCTA CCTCGCCACC GTGGTCCTGG CGGGCGGGCT GATGCGCCGC
GCGGCCTCGG CGGCGCAGCG GGCCGAGTGG CTTCCGGGCC TGATCGGCGG CGAAACCCGC
TACGCTTTCG CGCATCACGA GCGGCAGGCG CGCTACGACC TCCACGACGT CGGCCTGAGC
GCGCGCCGGG ACGGGGCGGG CTACGTCCTG GAGGGCGACA AGTCCCTGGT GCTGCACGGC
GACAGCGCCG ACCGGCTGAT CGTCTCGGCC CGCACCGCCG GCTCCCGGCG CGACCGGGGC
GGGATCGGGC TGTTCCTGGT CGATGCCAGG GCGGAGGGCG TCTCCCGCCG CGGCTACCCG
ACCCAGGACG GGCAGCGGGC GGCCGAGATC TCGCTCTCCT CGGTCAAGGT CGGGCCGGAG
GCGGTGCTGG GCGCGCCGGA GGACGCGCTG CCGGCGATCG AGCGGGTGGT CGAGGAGGCG
ATCGCGGCGC TCTGCGCCGA GGCGGTCGGC GCCATGGACC GGATGCACGC CCTCACCGTC
GAGTACCTCA AGACCCGCAA GCAGTTCGGC ACGCCGATCG GGTCATTCCA GGTGCTGCAG
CACCGGGCGG CCGACATGTT CATCGCCCTC GAACAGGCCC GCTCGATGGC CTTCCTGGCC
ACCATGATGG CCGGGGAGGA GGATGCGGCG GAGCGCGCGC GGGCGCTCTC GGGCGCCAAG
GTGCAGATCG GCCGCTCGGG CCGCATCGTC GGCCAGGGCG CGGTGCAGCT CCACGGCGGC
GTCGGCGTCA CCATGGAGTA CAGCGTCGGC CACTTCTTCA AGCGCGTGAC GATGATCGAC
ACCCTGTTCG GGGATGCCGA CCACCACCTC GCCCGGGTGG CTGCGATGGG GGGCCTGATC
GCGGCCTGA
|
|---|
| Protein sequence | MDFDLSEEQS LLKDSVERLL ADRYDFEART RHGRHPEGFS PEMWRSYAEQ GLLAVPFAEE
DGGIGGGPVE TMIVMEAFGR ALVLEPYLAT VVLAGGLMRR AASAAQRAEW LPGLIGGETR
YAFAHHERQA RYDLHDVGLS ARRDGAGYVL EGDKSLVLHG DSADRLIVSA RTAGSRRDRG
GIGLFLVDAR AEGVSRRGYP TQDGQRAAEI SLSSVKVGPE AVLGAPEDAL PAIERVVEEA
IAALCAEAVG AMDRMHALTV EYLKTRKQFG TPIGSFQVLQ HRAADMFIAL EQARSMAFLA
TMMAGEEDAA ERARALSGAK VQIGRSGRIV GQGAVQLHGG VGVTMEYSVG HFFKRVTMID
TLFGDADHHL ARVAAMGGLI AA
|
|---|
| |