Gene M446_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0003 
Symbol 
ID6129597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3158 
End bp4306 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content77% 
IMG OID641640346 
ProductDNA replication and repair protein RecF 
Protein accessionYP_001767025 
Protein GI170738370 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.393317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC CCGATCCCTT CCGCGTCACG CGCCTCATCG CCCGCGACTT CCGCAACCAC 
GCCAGCCTCG ACCTCGGCGT GGGCCGGCCC TTCGTGGCGC TGGTGGGCGA GAACGGTGCC
GGCAAGACCA ACATCCTCGA GGCGCTCTCG CTGTTCGCGC CCGGCCGGGG CCTGCGCCGG
GCCGATTTCG CCGCCATGGC GCGCGAGGGC GGGCCGGGCG GCTTCGCGGT GTCGCTCAGC
GTCGAGGGGC CGCACGGTGA GCACCGCGTC GGCACCGCCT GGGAGCCGCC GCAGGGGCGC
GAGGAGCGCG GCGGGCGCCA GTGCCGGATC GACGGAGCGA GCGCCCCCTC GCCCACCGCC
TTCGCGGAGC AGTTGCGGGT CGTCTGGCTC ACCCCGGACC TCGACGCGCT GTTCCGCGGC
CCGGCGGGGG ATCGGCGGCG CTTCCTCGAC CGCCTCGTCC TCGCGGTCGA TGCCGGCCAC
GGCAGCCGCG TCAGCGCCCT TGAGCGTGCC CTGCGCTCCC GCAACCGGCT GCTGGAGGAG
CGGCCCGAGG ACGGGCCCTG GCTCGACGCG ATCGAGCGCG AGGTGGCGGA ACTGGCGATC
GCCGTGGCGC TCGCCCGGCG CGAGACGGTG GAGCGCCTCG ACCGGCTGAT CCTCGCCACC
CGCGACGCGG CCTCGCCCTT CCCCTGGGCG GGGGTCCGGC TCGAGGGCGA CATCGACGAC
CTCGTGGCGG TCTGGCCGGC CGTGGACGCC GAGGACCGCT TCCGCGCGAC GCTGCGCCAG
AACCGCTTCC GCGACCGCGC CGCGGGCCGC ACGCTCGCCG GCCCGCAGGC CTCCGACCTC
GTGGTGCGCC ACGGCCCCAA GGACGTGCCG GCCGGCACCG CCTCGACCGG CGAGCAGAAG
GCGCTGCTGA TCGGCCTCGT GCTCGCCCAT GCCCGCCTGG TCGCCGGCAT GAGCGGGCTG
GCGCCCCTCG TCCTCCTCGA CGAGGTCGCG GCCCATCTCG ACCCGCGCCG GCGCGCGGGC
CTGTTCGACG CCCTGGAGGC GCTGCCGGGG CAGGTCTGGA TGACCGGGGC GGATCCGGCG
CTGTTCGCGG AACTCGGGAG CCGCGGCGAC GTGGTCGCGG TGGCGGAGGG GCAGGTGCGG
CCCGGCTGA
 
Protein sequence
MAAPDPFRVT RLIARDFRNH ASLDLGVGRP FVALVGENGA GKTNILEALS LFAPGRGLRR 
ADFAAMAREG GPGGFAVSLS VEGPHGEHRV GTAWEPPQGR EERGGRQCRI DGASAPSPTA
FAEQLRVVWL TPDLDALFRG PAGDRRRFLD RLVLAVDAGH GSRVSALERA LRSRNRLLEE
RPEDGPWLDA IEREVAELAI AVALARRETV ERLDRLILAT RDAASPFPWA GVRLEGDIDD
LVAVWPAVDA EDRFRATLRQ NRFRDRAAGR TLAGPQASDL VVRHGPKDVP AGTASTGEQK
ALLIGLVLAH ARLVAGMSGL APLVLLDEVA AHLDPRRRAG LFDALEALPG QVWMTGADPA
LFAELGSRGD VVAVAEGQVR PG