Gene Lreu_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1937 
SymbolmurE 
ID5189445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1989867 
End bp1991417 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content39% 
IMG OID640591775 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001272506 
Protein GI148545136 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGC ATATTACACC TGCTTTAGCA TTATTGCGCG AGCACCATTT ATTGGATCAT 
GTTAGTAATT TGACTGATTT TACCGCAACC AGCGTGTCCT ATGATTCACG GAAGGTAAAA
TCAGGAACGT TATTCTTTTG TAAAGGAAAT TTTTTGCCTA AATACCTAGC ATCCGCTAAA
GAAAAAGGTG CGATTGCGTA TGTGGCTGAA AAAGAATATC CAGAAGGCGA AGGATTGCCA
GCTATTATCG TAAACGACGA ACAAAAAGCA ATGTCTTTAC TGGGGGCAGC ATTTTACGGT
TATCCACAAA ATGATTTGTT CATTATTGCG ATTACAGGAA CAAAAGGCAA AACAACAACG
GCTTATTTTG CTGACCATAT TTTAGCCCAA AGTACAGCTG ATCATATTGC CCTTTTTTCA
ACGCTTGATC GGATTCTAGG CAATAAGCCG GAAGATAAAT TTAAATCTGA TTTGACTACT
CCCGAATCCT TAGACCTTTT CCATGATATG CGCGTTGCCG TTGATAATGG GATGACGCAC
TTAGTAATGG AAGTATCATC GCAAGCATAC AAGAAAAACC GGATTTATGG TTTGAAGTAT
GATGTTGGAA TTTTCTTAAA CATTTCGCCA GACCATATCG GACGAAATGA GCACCCAACT
TTTGCTGATT ATCTTCACTG CAAGGAACAA TTATTAGTAA ATTCTGCTAA ATGCTTAATC
AATGCAGAAA CGGAAAAATT TACCGATGTT TATTACACTG CTAAGGCAAC TACACAACCA
GAAGACATTT TCTTATTTGC ACGGCGAGGA GCAAACATCG AATTACCTGA CAATGCCCAA
ATAGATTTTG AATATCGAAA TGATTTAGAA GATCTTCATG AAAGTGAATT TGAGTTGACC
GCCTTAACTG AGAAAGCAAA GCAGTTAAAC TTAGATGGCC GTTATAAAAC GAGTGTCCCT
GGAGATTATA ATGAAGGAAA TGCGGTCGCT GCAATCATTG CCAGTGGATT AGCTGGGGCG
AGTGCTAACG ATGCCGTAGA AACATTAAAT CATGTTCATA TCCGTGGTCG AATGGAAATG
ATTAACAGTA ATACCCATGG AACAATTTAT GTTGATTATG CCCATAATTA CGCTAGCTTG
AAGCGACTCT TGGCATTCTT AAAACGACAA ACTAATGCTG GCAAAGTAAC AGTTGTCTTA
GGAGCGACCG GTGATAAAGG TATTTCGCGC CGTCCAGGGT TTGGAAAAGC TTTAACTGAA
GAACAACCAG ATGAAGTAAT TTTGACGACT GATGATCCAG GGTTTGAGGA TCCGATGACT
ATTGCCCGGG AAATAGATTC TTATATTGAT CATGATAAAG TAAAACATAT TCAATTTGAA
ATGGACCGCG AAACGGCGAT CAAAAAGGCA ATTGACGGTA GTGAAAATGA TGATATTGTA
GTCCTTGCAG GGAAAGGTGA AGATCCTTAT CAAAAAGTTA ATGGGGAAGA TGTCCCTTAC
CCAACTGATG TGAAGATTGC ACGTGATTAT ATTAATGAAC TAGAAAGATA A
 
Protein sequence
MELHITPALA LLREHHLLDH VSNLTDFTAT SVSYDSRKVK SGTLFFCKGN FLPKYLASAK 
EKGAIAYVAE KEYPEGEGLP AIIVNDEQKA MSLLGAAFYG YPQNDLFIIA ITGTKGKTTT
AYFADHILAQ STADHIALFS TLDRILGNKP EDKFKSDLTT PESLDLFHDM RVAVDNGMTH
LVMEVSSQAY KKNRIYGLKY DVGIFLNISP DHIGRNEHPT FADYLHCKEQ LLVNSAKCLI
NAETEKFTDV YYTAKATTQP EDIFLFARRG ANIELPDNAQ IDFEYRNDLE DLHESEFELT
ALTEKAKQLN LDGRYKTSVP GDYNEGNAVA AIIASGLAGA SANDAVETLN HVHIRGRMEM
INSNTHGTIY VDYAHNYASL KRLLAFLKRQ TNAGKVTVVL GATGDKGISR RPGFGKALTE
EQPDEVILTT DDPGFEDPMT IAREIDSYID HDKVKHIQFE MDRETAIKKA IDGSENDDIV
VLAGKGEDPY QKVNGEDVPY PTDVKIARDY INELER