Gene Lreu_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1890 
Symbol 
ID5189131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1950005 
End bp1951336 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content37% 
IMG OID640591733 
Productglycosyl transferase family protein 
Protein accessionYP_001272464 
Protein GI148545094 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCTA ACATTTTCTA TGAAGCATTT CAAACCAGCT CACCATGGAT GGTCTTTCTT 
ATAATAATCA ATTTAATTTT ATGTATATAT CCTATTTTAG GAGCGATGTT CTGGTTCTTT
GGCGCAATAT CATATATTCT CTTTCGCCAA AAAGAAGAAT TACCACCAAA AGCCGAACTT
ACCCCCGAAC CTTTTATCAC GATTATGATT CCAGCTCATA ATGAAGAAAT TGTAATAAAA
AGTACTTTAG AGTATTTATT AACCCAATTG AATTATCACA ATTATGAAGT GCTGGTAATG
GATGATGGAA GCGATGATCG CACCCCTGAG ATTCTTCATT CAATGCAAAC AAAATATTCT
CGCCTCAGAG TTATTAGAAT CGAACAAAAT CAAGGAAAGG CCCATGCATT TAATATTGGG
CTTTTCTTTG CTAAGGGTGA ATATATTTTA AGCAATGATG CTGATACTAT TCCTGAAACT
GATGCACTGA TAAAGTATAT GCAATATTTT ACAAGTGCTA ACGGGATTAA CTATGCTGCT
ATTACTGCGA ATATGGATGT TTATAATCGT TCCTCATTAT GGGGTAAATC TCAAACGGTT
GAATTCTCCA GTATCGTTGG CATAATCAAG CGAAGCCAAA CTGCCATCAA TAACACGATG
TATGCATATA GCGGTGCAAA TACCATGTAT CGACGCGATT TCCTTATTAA TGTTGGTGGT
TTTCGCCAAG ATCGTGCGAC TGAGGACATT AGCATTGCCT GGGACCATAC ATTCATTAAT
GCTACTCCGA AGTTTGCCCC AGATATCGTT TTCCATATGA ATGTTCCTGA AACGTTTCAC
GATTTATATC GGCAACGTAA ACGGTGGGCA CAAGGCGGGT CAGAAGTTTG GCTTTCTAAT
TTTCTGAAAG TCTTTCGCCA TCCGTGGCAA TATCGGTTTG TCATCCCCAT GCTAACCGAC
ACAACCTTAT CGATTATTTG GTCTTTCTTT TTTTGGATAA CAAGTATCAT TTTTATTATT
ACAATGCTGT CTTTTGCAAT AACTGGTAAC TACGAACGGG TTTGGCACGG CATCGTTATG
AGTATGATCT TTGTTAACTT TCAATTAATA GCCGGTCTTT TTCAAGTGCT GGCGGCGTTA
ATTCTTGATT TTAATGGATC TAAGTTACGC TATTTAATGT TTTCGCCACT TTATCTCTTA
TTTACCTGGA TCGTTAATCC TTTAACAATC GTTACTACAT TTCATAAAGC GATAAAAACT
GTTACTGGTC ATGGAAGTGG TAAATGGATT AGTCCTGAAA GAAAGGTAGT TGATAATAAT
GGCAAGTTTT GA
 
Protein sequence
MVSNIFYEAF QTSSPWMVFL IIINLILCIY PILGAMFWFF GAISYILFRQ KEELPPKAEL 
TPEPFITIMI PAHNEEIVIK STLEYLLTQL NYHNYEVLVM DDGSDDRTPE ILHSMQTKYS
RLRVIRIEQN QGKAHAFNIG LFFAKGEYIL SNDADTIPET DALIKYMQYF TSANGINYAA
ITANMDVYNR SSLWGKSQTV EFSSIVGIIK RSQTAINNTM YAYSGANTMY RRDFLINVGG
FRQDRATEDI SIAWDHTFIN ATPKFAPDIV FHMNVPETFH DLYRQRKRWA QGGSEVWLSN
FLKVFRHPWQ YRFVIPMLTD TTLSIIWSFF FWITSIIFII TMLSFAITGN YERVWHGIVM
SMIFVNFQLI AGLFQVLAAL ILDFNGSKLR YLMFSPLYLL FTWIVNPLTI VTTFHKAIKT
VTGHGSGKWI SPERKVVDNN GKF