Gene Lreu_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1885 
Symbol 
ID5190139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1944940 
End bp1945950 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID640591728 
Productasparagine synthetase AsnA 
Protein accessionYP_001272459 
Protein GI148545089 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2502] Asparagine synthetase A 
TIGRFAM ID[TIGR00669] aspartate--ammonia ligase, AsnA-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000727816 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAA CTATTCCAAA GGATTACGAT CCACGTCTTT CAATTAGAGA AACTGAAGCT 
GCTATTCGTT ATATTCGTGA AACTTTCCAA GACGAATTTG GTAAAGAGTT AAACCTTCAA
CGGATGTCTG CACCAATGTT TGTTGAAAAG AGTACTGGAT TAAACGATAA CTTAAACGGT
GTTGAACAAC CAGTATCGTT TGAAATGAAG GATATGCCAA ACGAAACTGT TGAAATTGTC
CATTCTCTCG CTAAGTGGAA ACGTCTTGCT CTTAAGCGGT ACGGTTTTGG GATGCATGAA
GGTCTCTACA CCAACATGAA CGCCATTCGT AAGGAAGAAG ACCTCGATAA CTTCCACTCA
ATTTATGTTG ACCAGTGGGA CTGGGAAAAG ATTATTAGTA AGGATGAACG AACAGAAGAA
ACCTTAAAGG ATACAGTTCG TGATATTTTC AAAGTGATTA AGCACATGGA ACATGAAGTT
TGGTACAAGT TCCCGCAAGC TGTTTACCAT TTACCAGATG AGATTCACTT TGTTACAACG
CAAGAGCTTG AAGATCGGTG GCCAGACCTC ACCCCACTTG AACGGGAAGA TAAAATTGCT
AAAGAACTTG GTGCTGTTTT TGTAATGAAG ATCGGTGACA AGTTGCAACG CAGTGGTAAG
CCTCACGATG GTCGAGCACC TGACTACGAT GACTGGAGCT TAAACGGTGA TATTATTTTC
TGGTATGAAC CTCTTCAACG CCGGATCGAA GTTTCAAGTA TGGGAATTCG GGTTAGTCCA
GAATCAATGA AATACCAACT TGAACAAGCC GATGCAACTG ATCGTGAAAA ATTACCATTC
CATAAAATGT TGCTCAATGG CGAATTACCA TATACAATTG GTGGAGGAAT TGGTCAATCC
CGTCTCTGTA TGCTCCTTCT TGGCAAAGCT CATATTGGAG AAGTACAGGC AAGTATTTGG
CCAGAAGATA TGATTAAGAA GTGTGAAGAA AACCACATTC AAATTCTATA A
 
Protein sequence
MDLTIPKDYD PRLSIRETEA AIRYIRETFQ DEFGKELNLQ RMSAPMFVEK STGLNDNLNG 
VEQPVSFEMK DMPNETVEIV HSLAKWKRLA LKRYGFGMHE GLYTNMNAIR KEEDLDNFHS
IYVDQWDWEK IISKDERTEE TLKDTVRDIF KVIKHMEHEV WYKFPQAVYH LPDEIHFVTT
QELEDRWPDL TPLEREDKIA KELGAVFVMK IGDKLQRSGK PHDGRAPDYD DWSLNGDIIF
WYEPLQRRIE VSSMGIRVSP ESMKYQLEQA DATDREKLPF HKMLLNGELP YTIGGGIGQS
RLCMLLLGKA HIGEVQASIW PEDMIKKCEE NHIQIL