Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1788 |
Symbol | |
ID | 5188939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1838729 |
End bp | 1839709 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640591633 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001272364 |
Protein GI | 148544994 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.841389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC GTTATTTCAA ATTATTCTGG CGCTCAATCC TTTTTCCTAC TATTGGATAT CTTTTTCTCT TAGGGCTGAT TGGGCTTTTA GTAATCTTAT ATAATCTCCC AACTGTTTTT TGGGGCGATG TGATTCGCTT TTCTCTTCCC TTTTTTATAG TGTGGCTTAT CGGTAGTGGT GCAATTAAAT ATTATCGATT GCGCCATTTA AATATTTCTC AGCTCGATAA ATTCACTCCT ACCAATATGA CTGAGGGAAA ACTTGTTGAA CTATTGCAAG ATGAACAAGC AAAAAACATT GACACAATCC GTCAGTTACA AGCAACTCAA CACGAACAGC TTGACCACCT TGAATTATTT ACTCATGAAA TTAAAAACTA TTTAACAAGT CTTAATGCCG CGGCAGAAAA TTCACCAACT GTCGCAAGTC CAGAAGTAAA AAAGAATATC CACCAAGCTA ACTATTATCT CAATTTGTTG TTAAATGACG AACGACTAGC AATTAATAAT CATGATTACG ATTTTCAATG GATTGATATT GCCAACTTAA TCAATAATAT TTTGCAACAA AATTCTGCGG CCTTCATTCA TAAACAATTG ATTCCAGAAT TAACCGGCTT GGACGGAATT AAGGTTCTCA CTGATCGTAA ATGGTTGCTG TTCTGCATTG AACAACTACT TTCAAATGCA ATTAAATACT CAGCTCCTAA TAGTACAATC AATATTTCCT GGGAAATGAA TTCTTTGCGG ATCGCTGACC ATGGATGCGG TATCTCAATG AATGATCTTC CGCGAATCTT TGATAATGGT TTTACCGGGA AAAACGGGCA CCAAACAACT GCTGCTACTG GGATGGGACT GTACCTTGTT AAAAAAGTCA CTGAGCACTT AAATTTCAAG GTTAGCATCT CATCAGTTCA ATCTAAGGGA ACAACAGCTA TTCTATCTTT CTTACCAGAT AATATCAGAT CATCAAACTA A
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Protein sequence | MNKRYFKLFW RSILFPTIGY LFLLGLIGLL VILYNLPTVF WGDVIRFSLP FFIVWLIGSG AIKYYRLRHL NISQLDKFTP TNMTEGKLVE LLQDEQAKNI DTIRQLQATQ HEQLDHLELF THEIKNYLTS LNAAAENSPT VASPEVKKNI HQANYYLNLL LNDERLAINN HDYDFQWIDI ANLINNILQQ NSAAFIHKQL IPELTGLDGI KVLTDRKWLL FCIEQLLSNA IKYSAPNSTI NISWEMNSLR IADHGCGISM NDLPRIFDNG FTGKNGHQTT AATGMGLYLV KKVTEHLNFK VSISSVQSKG TTAILSFLPD NIRSSN
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