Gene Lreu_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1788 
Symbol 
ID5188939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1838729 
End bp1839709 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content36% 
IMG OID640591633 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001272364 
Protein GI148544994 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.841389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC GTTATTTCAA ATTATTCTGG CGCTCAATCC TTTTTCCTAC TATTGGATAT 
CTTTTTCTCT TAGGGCTGAT TGGGCTTTTA GTAATCTTAT ATAATCTCCC AACTGTTTTT
TGGGGCGATG TGATTCGCTT TTCTCTTCCC TTTTTTATAG TGTGGCTTAT CGGTAGTGGT
GCAATTAAAT ATTATCGATT GCGCCATTTA AATATTTCTC AGCTCGATAA ATTCACTCCT
ACCAATATGA CTGAGGGAAA ACTTGTTGAA CTATTGCAAG ATGAACAAGC AAAAAACATT
GACACAATCC GTCAGTTACA AGCAACTCAA CACGAACAGC TTGACCACCT TGAATTATTT
ACTCATGAAA TTAAAAACTA TTTAACAAGT CTTAATGCCG CGGCAGAAAA TTCACCAACT
GTCGCAAGTC CAGAAGTAAA AAAGAATATC CACCAAGCTA ACTATTATCT CAATTTGTTG
TTAAATGACG AACGACTAGC AATTAATAAT CATGATTACG ATTTTCAATG GATTGATATT
GCCAACTTAA TCAATAATAT TTTGCAACAA AATTCTGCGG CCTTCATTCA TAAACAATTG
ATTCCAGAAT TAACCGGCTT GGACGGAATT AAGGTTCTCA CTGATCGTAA ATGGTTGCTG
TTCTGCATTG AACAACTACT TTCAAATGCA ATTAAATACT CAGCTCCTAA TAGTACAATC
AATATTTCCT GGGAAATGAA TTCTTTGCGG ATCGCTGACC ATGGATGCGG TATCTCAATG
AATGATCTTC CGCGAATCTT TGATAATGGT TTTACCGGGA AAAACGGGCA CCAAACAACT
GCTGCTACTG GGATGGGACT GTACCTTGTT AAAAAAGTCA CTGAGCACTT AAATTTCAAG
GTTAGCATCT CATCAGTTCA ATCTAAGGGA ACAACAGCTA TTCTATCTTT CTTACCAGAT
AATATCAGAT CATCAAACTA A
 
Protein sequence
MNKRYFKLFW RSILFPTIGY LFLLGLIGLL VILYNLPTVF WGDVIRFSLP FFIVWLIGSG 
AIKYYRLRHL NISQLDKFTP TNMTEGKLVE LLQDEQAKNI DTIRQLQATQ HEQLDHLELF
THEIKNYLTS LNAAAENSPT VASPEVKKNI HQANYYLNLL LNDERLAINN HDYDFQWIDI
ANLINNILQQ NSAAFIHKQL IPELTGLDGI KVLTDRKWLL FCIEQLLSNA IKYSAPNSTI
NISWEMNSLR IADHGCGISM NDLPRIFDNG FTGKNGHQTT AATGMGLYLV KKVTEHLNFK
VSISSVQSKG TTAILSFLPD NIRSSN