Gene Lreu_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1628 
Symbol 
ID5188309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1686466 
End bp1687743 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content39% 
IMG OID640591474 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001272205 
Protein GI148544835 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACTA ACATACAAAC TCTAGAACCA GTAATTATTA CTGGATTAAA TACTGGGCAA 
GAAGACTTTG ACTACTCAAT GGTTGAACTT GCTGAATTAG CACAAGCAAA TCACATGGAA
GTTATCGATC GGATTGATCA AGTCATCGAT CGCCCTAATC CCGCTACCTA CTTTGGAAAG
GGCAAAGTAG AAGAAATTCG CGATGTGGCT GATGCTAATC ACGTTCCTAC TATTATTACC
AATGATGAAT TATCACCAAG TCAACTACGT AATCTTGAAG AAGGAACCGG ATGTCGTATT
CTAGACCGAA CTGCTCTTAT TTTAGAGATT TTCGCAACTC GTGCTCAATC TAAAGAAGCG
AAACTTCAGG TGCAAATCGC TGAACTTCAA TATCGCTTAC CACGATTGCA AACTAGTGCA
AGTGAGCGCC TAGACCAGCA AACTGGTGGA GGAAGTGGCT TTACTAACCG GGGGGCTGGG
GAAACTAAAC TTGAAATGGA TCGTCGAACT ATCCAACATC AAATTTCCCA CCTTCGTCAA
GAATTAGCAG CCATTGATAA ATCTGAACAG ACAAAGCGAA AGCAACGAGC AAAAAGCGCC
ATTCCAACAG CGGCCCTCGT TGGCTATACC AATGCTGGTA AATCAACTAT TATGAATGGC
CTTGTAAGAA GATATGGAGC TGCTGAAGAA AAAACCGTTT TTGAAAAGAA TATGTTATTC
GCGACCCTTG ATACAAGTGT CCGACAACTA ACGCTTCCAG ATCAAAAACG TTTCTTATTA
AGTGATACGG TTGGATTCGT TAGCAAGTTG CCTACTCACC TTGTTGAATC ATTTAAATCC
ACGCTTGCAG AAGCCGCTAA CGCCGACTTA TTAATCCAGG TTATTGATTA TTCTGATCCG
CATTACAAGG AAATGATGGA AACAACTAAC GAGACTTTAA AACAGATTGG AATTAATGAT
ATTCCAATGA TCAATGTGTT TAATAAAGCA GATAAAACTG AAATAGAATT TCCTATCCTC
GAAGGTGACG ATCAAGTTGT TATCTCAGCA AAGCAGGATG CTTCATTAGA TCTTCTCGTT
GACGTTATTA AGAAGCGTCT CTTTAAAGAC TATGTTACTA CCACGCTTTT AATTCCATTT
ACTGATGGGC ACGTCGTTTC TTACCTCAAT GAACACACTA ATATTTTAGA TACTACTTAT
GAAAGTGATG GAACATTATT AACGGTAGAA ATGTCAGTTC AAGATTATCA TCGGTTTGGA
AAGTATGAAA AGAACTAA
 
Protein sequence
METNIQTLEP VIITGLNTGQ EDFDYSMVEL AELAQANHME VIDRIDQVID RPNPATYFGK 
GKVEEIRDVA DANHVPTIIT NDELSPSQLR NLEEGTGCRI LDRTALILEI FATRAQSKEA
KLQVQIAELQ YRLPRLQTSA SERLDQQTGG GSGFTNRGAG ETKLEMDRRT IQHQISHLRQ
ELAAIDKSEQ TKRKQRAKSA IPTAALVGYT NAGKSTIMNG LVRRYGAAEE KTVFEKNMLF
ATLDTSVRQL TLPDQKRFLL SDTVGFVSKL PTHLVESFKS TLAEAANADL LIQVIDYSDP
HYKEMMETTN ETLKQIGIND IPMINVFNKA DKTEIEFPIL EGDDQVVISA KQDASLDLLV
DVIKKRLFKD YVTTTLLIPF TDGHVVSYLN EHTNILDTTY ESDGTLLTVE MSVQDYHRFG
KYEKN