Gene Lreu_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1557 
Symbol 
ID5189303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1615351 
End bp1616019 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID640591406 
ProductTrkA domain-containing protein 
Protein accessionYP_001272137 
Protein GI148544767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.176981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTAAAA AAGAAAGTTA TGCTGTTATT GGAATTGGAC AATTTGGGGC CTCAATATGT 
GAAGCTTTAG TTCAAGCAGG CCAAGAAGTA TTGGCGATTG ATTCTAGTGA AGAAGTGGTA
AATGAATTTG CGGGGTCAGT TATGCGGGCG GTAATTGCGG ATGCGCAAGA TGAGGATGCT
CTGCGTGACC TTGATATCGG TAGTTTTGAT CATGTGTATA TTTCAATCGG AAAAAATGTT
GAAGCAAGTA TCATGGCCAC GCTAATCGCT AAAGAACTTG GGGCGCCAGA TGTAATCTGT
CGGGCTGAAA ATGTTAATCA TGCGCGCGTT TTGGAACGAA TTGGTGCTGA TATGGTTGTT
CGTCCAGAGC ATGATTTAGC TAAGCGACTT ATTTTTCAAC AACTAAACCC AAGCGTCGTC
GATTATGTCA CCTTAAGTAA GGAAATAACT TTGGCAGAAG TAAATATTAA TAATCCCAAG
TTCTTTAATA AGACCTTAGA CGAACTGGAT TTTCGTAATC GTTATAATGT CAATGTGATT
ATCATTGTTA GTAAAGATGA TGAAGTTAAT CAAATGCCGC AAGCTAATGA TGTTATTCAA
CCGCACGATA AAATCACAGT TGTTGGGCAG TTAAAGGATA TTCGGAAACT AAACGATATT
GTTAGTTAA
 
Protein sequence
MAKKESYAVI GIGQFGASIC EALVQAGQEV LAIDSSEEVV NEFAGSVMRA VIADAQDEDA 
LRDLDIGSFD HVYISIGKNV EASIMATLIA KELGAPDVIC RAENVNHARV LERIGADMVV
RPEHDLAKRL IFQQLNPSVV DYVTLSKEIT LAEVNINNPK FFNKTLDELD FRNRYNVNVI
IIVSKDDEVN QMPQANDVIQ PHDKITVVGQ LKDIRKLNDI VS