Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1557 |
Symbol | |
ID | 5189303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1615351 |
End bp | 1616019 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640591406 |
Product | TrkA domain-containing protein |
Protein accession | YP_001272137 |
Protein GI | 148544767 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.176981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAAAA AAGAAAGTTA TGCTGTTATT GGAATTGGAC AATTTGGGGC CTCAATATGT GAAGCTTTAG TTCAAGCAGG CCAAGAAGTA TTGGCGATTG ATTCTAGTGA AGAAGTGGTA AATGAATTTG CGGGGTCAGT TATGCGGGCG GTAATTGCGG ATGCGCAAGA TGAGGATGCT CTGCGTGACC TTGATATCGG TAGTTTTGAT CATGTGTATA TTTCAATCGG AAAAAATGTT GAAGCAAGTA TCATGGCCAC GCTAATCGCT AAAGAACTTG GGGCGCCAGA TGTAATCTGT CGGGCTGAAA ATGTTAATCA TGCGCGCGTT TTGGAACGAA TTGGTGCTGA TATGGTTGTT CGTCCAGAGC ATGATTTAGC TAAGCGACTT ATTTTTCAAC AACTAAACCC AAGCGTCGTC GATTATGTCA CCTTAAGTAA GGAAATAACT TTGGCAGAAG TAAATATTAA TAATCCCAAG TTCTTTAATA AGACCTTAGA CGAACTGGAT TTTCGTAATC GTTATAATGT CAATGTGATT ATCATTGTTA GTAAAGATGA TGAAGTTAAT CAAATGCCGC AAGCTAATGA TGTTATTCAA CCGCACGATA AAATCACAGT TGTTGGGCAG TTAAAGGATA TTCGGAAACT AAACGATATT GTTAGTTAA
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Protein sequence | MAKKESYAVI GIGQFGASIC EALVQAGQEV LAIDSSEEVV NEFAGSVMRA VIADAQDEDA LRDLDIGSFD HVYISIGKNV EASIMATLIA KELGAPDVIC RAENVNHARV LERIGADMVV RPEHDLAKRL IFQQLNPSVV DYVTLSKEIT LAEVNINNPK FFNKTLDELD FRNRYNVNVI IIVSKDDEVN QMPQANDVIQ PHDKITVVGQ LKDIRKLNDI VS
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