Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1519 |
Symbol | |
ID | 5189309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1569729 |
End bp | 1571237 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591369 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001272101 |
Protein GI | 148544731 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCAAG AGCAACAACC TGTTGATATT AATGGTCAAA CTTATAATCG TTCCTTAATG ATCTTCGTCC TATTAATTGG AGCTTTTTGT ACCATTTTAA ACCAAACTAT TCTTTCAACA GCCTTTCCCG CATTAATGGA TGCTTTTAAT ATTAGTACTG CCACCGTTCA GTGGTTAACT ACTGGTTTCT TAATGGTTAA TGGGATTATG ATCCCCGTAA GTGCCTATTT AACCAGTCGT TTTAATACTA AGAGTCTTTT TATCATTGCT ATGTCAACCT TTGAAGTTGG GACAATCTTA GCATGGATTG CTCCATCGTT TGCCGTTTTA TTAGCCGGTC GTCTTATCCA AGCGGTCGGA GTAGGAATTA ACATGCCCCT AATGCAGAAT ATTATGCTGA CTGTTTATCC TCCTGAGAAA CGTGGCGCTG CGATGGGAGT AAACGGCCTA GTTATTGGAT TAGCCCCAGC AATCGGGCCT GCTCTATCTG GATGGGTTAT CGATAGTTAT AGCTGGCGGT GGCTTTTCGG AATGATCGCC CCCATTACTG CTTTAGTTAT CATTGTTAGT TTTTTTGCAG TTAAAAATGT TATTCCTAAT AAAAAGCCGC ATCTTGACTG GCTTTCTGTT GTTATTTCAA CATTAGGATT TGGGAGCATG CTTTACGGAT TCTCAAGTGT CGGTGATAAG GGGTGGACAG ATCCGGTTGT CCTTTCAACC ATTATCATTG GGGTGATTTT AGTTGGAATT CTAATCATGC GTCAAAATAA GCTAGACGAT CCGTTCCTTG AATTCAAGGT ATTTGAAAGC AAAGAATTCT CCCTTGCGAC CATTCTTAGT TCAATTGTAA TGATGGCAAT GGTTGGGGTA GAATTCGTCA TCCCTCTTTA CCTTCAAATC ATTCATGGAA TGTCCGCCTT CCATTCAGGT CTTACCCTTT TATTTGGAGC CCTTTTCATG GGAATTATGA GTCCAATTAC TGGGAACTTA TTTGACCGTC ATGGTGCTAA ACGCTTAGCC TTTACGGGAA TGTTTATCTT AACTGTTGGA ACAATTCCTT TTGCCTTTAT TACTCGTGAT ACCCCAACTA TTTATATTGT CTTCTTATAT GCAGTCCGGA TGTTTGGTAT TTCAATGGTA ATGATGCCAG TTACTACAGC GGGAATGAAT TCTCTTCCTT ACAATCTAAT TTCGCACGGT ACAGCTGTTA ACAATACCAT TCGTCAAGTC GCTACTTCTG TGGGAACAGC TATCATGATC TCTGTTTTGA CAAATATTAC CAATAGCAAT CGACCTGCTC ATTCACTGCT GACACAATCC CCATTACAAT ATAAAGCAAA GATGTTTGAT GCTACTTTGA TGGGGTACCA TGCAGCATTC TGGTTTGCAA TCGCCTTCTC ACTCATTGGT TTATTCCTTA CATTCTTTGT TACAAGTGGT AATGGAATTC ACCTCCGCCT TGATAGCGAA GACATTGCAG AACCAACTGA TAAAGGAGGG ATGAAGTAA
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Protein sequence | MNQEQQPVDI NGQTYNRSLM IFVLLIGAFC TILNQTILST AFPALMDAFN ISTATVQWLT TGFLMVNGIM IPVSAYLTSR FNTKSLFIIA MSTFEVGTIL AWIAPSFAVL LAGRLIQAVG VGINMPLMQN IMLTVYPPEK RGAAMGVNGL VIGLAPAIGP ALSGWVIDSY SWRWLFGMIA PITALVIIVS FFAVKNVIPN KKPHLDWLSV VISTLGFGSM LYGFSSVGDK GWTDPVVLST IIIGVILVGI LIMRQNKLDD PFLEFKVFES KEFSLATILS SIVMMAMVGV EFVIPLYLQI IHGMSAFHSG LTLLFGALFM GIMSPITGNL FDRHGAKRLA FTGMFILTVG TIPFAFITRD TPTIYIVFLY AVRMFGISMV MMPVTTAGMN SLPYNLISHG TAVNNTIRQV ATSVGTAIMI SVLTNITNSN RPAHSLLTQS PLQYKAKMFD ATLMGYHAAF WFAIAFSLIG LFLTFFVTSG NGIHLRLDSE DIAEPTDKGG MK
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