Gene Lreu_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1519 
Symbol 
ID5189309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1569729 
End bp1571237 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content40% 
IMG OID640591369 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001272101 
Protein GI148544731 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCAAG AGCAACAACC TGTTGATATT AATGGTCAAA CTTATAATCG TTCCTTAATG 
ATCTTCGTCC TATTAATTGG AGCTTTTTGT ACCATTTTAA ACCAAACTAT TCTTTCAACA
GCCTTTCCCG CATTAATGGA TGCTTTTAAT ATTAGTACTG CCACCGTTCA GTGGTTAACT
ACTGGTTTCT TAATGGTTAA TGGGATTATG ATCCCCGTAA GTGCCTATTT AACCAGTCGT
TTTAATACTA AGAGTCTTTT TATCATTGCT ATGTCAACCT TTGAAGTTGG GACAATCTTA
GCATGGATTG CTCCATCGTT TGCCGTTTTA TTAGCCGGTC GTCTTATCCA AGCGGTCGGA
GTAGGAATTA ACATGCCCCT AATGCAGAAT ATTATGCTGA CTGTTTATCC TCCTGAGAAA
CGTGGCGCTG CGATGGGAGT AAACGGCCTA GTTATTGGAT TAGCCCCAGC AATCGGGCCT
GCTCTATCTG GATGGGTTAT CGATAGTTAT AGCTGGCGGT GGCTTTTCGG AATGATCGCC
CCCATTACTG CTTTAGTTAT CATTGTTAGT TTTTTTGCAG TTAAAAATGT TATTCCTAAT
AAAAAGCCGC ATCTTGACTG GCTTTCTGTT GTTATTTCAA CATTAGGATT TGGGAGCATG
CTTTACGGAT TCTCAAGTGT CGGTGATAAG GGGTGGACAG ATCCGGTTGT CCTTTCAACC
ATTATCATTG GGGTGATTTT AGTTGGAATT CTAATCATGC GTCAAAATAA GCTAGACGAT
CCGTTCCTTG AATTCAAGGT ATTTGAAAGC AAAGAATTCT CCCTTGCGAC CATTCTTAGT
TCAATTGTAA TGATGGCAAT GGTTGGGGTA GAATTCGTCA TCCCTCTTTA CCTTCAAATC
ATTCATGGAA TGTCCGCCTT CCATTCAGGT CTTACCCTTT TATTTGGAGC CCTTTTCATG
GGAATTATGA GTCCAATTAC TGGGAACTTA TTTGACCGTC ATGGTGCTAA ACGCTTAGCC
TTTACGGGAA TGTTTATCTT AACTGTTGGA ACAATTCCTT TTGCCTTTAT TACTCGTGAT
ACCCCAACTA TTTATATTGT CTTCTTATAT GCAGTCCGGA TGTTTGGTAT TTCAATGGTA
ATGATGCCAG TTACTACAGC GGGAATGAAT TCTCTTCCTT ACAATCTAAT TTCGCACGGT
ACAGCTGTTA ACAATACCAT TCGTCAAGTC GCTACTTCTG TGGGAACAGC TATCATGATC
TCTGTTTTGA CAAATATTAC CAATAGCAAT CGACCTGCTC ATTCACTGCT GACACAATCC
CCATTACAAT ATAAAGCAAA GATGTTTGAT GCTACTTTGA TGGGGTACCA TGCAGCATTC
TGGTTTGCAA TCGCCTTCTC ACTCATTGGT TTATTCCTTA CATTCTTTGT TACAAGTGGT
AATGGAATTC ACCTCCGCCT TGATAGCGAA GACATTGCAG AACCAACTGA TAAAGGAGGG
ATGAAGTAA
 
Protein sequence
MNQEQQPVDI NGQTYNRSLM IFVLLIGAFC TILNQTILST AFPALMDAFN ISTATVQWLT 
TGFLMVNGIM IPVSAYLTSR FNTKSLFIIA MSTFEVGTIL AWIAPSFAVL LAGRLIQAVG
VGINMPLMQN IMLTVYPPEK RGAAMGVNGL VIGLAPAIGP ALSGWVIDSY SWRWLFGMIA
PITALVIIVS FFAVKNVIPN KKPHLDWLSV VISTLGFGSM LYGFSSVGDK GWTDPVVLST
IIIGVILVGI LIMRQNKLDD PFLEFKVFES KEFSLATILS SIVMMAMVGV EFVIPLYLQI
IHGMSAFHSG LTLLFGALFM GIMSPITGNL FDRHGAKRLA FTGMFILTVG TIPFAFITRD
TPTIYIVFLY AVRMFGISMV MMPVTTAGMN SLPYNLISHG TAVNNTIRQV ATSVGTAIMI
SVLTNITNSN RPAHSLLTQS PLQYKAKMFD ATLMGYHAAF WFAIAFSLIG LFLTFFVTSG
NGIHLRLDSE DIAEPTDKGG MK