Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1504 |
Symbol | |
ID | 5189034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1556888 |
End bp | 1557643 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591354 |
Product | hypothetical protein |
Protein accession | YP_001272086 |
Protein GI | 148544716 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.170205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACAA AACGACGACA AGCACTCGCA CTTAAAACTT GTTTACTGGC TGGGAGACTT TTAATTGAAA ACGGCTCAAA TATGGAACGA GTTAACGATA CCTTATCTCG AATGGCCCAA AGTGCTGGCT TACATGACTT TCAGGCATTT ACAACTGTGA CCGGAATTGT AGTCGGAACA ATTAATGATC CCCATGCTCA AGTAATTACT ATTCGTCATC GAAAAAATAA TTTAAGTAAA ATTGCGGAGG TAAATGAAGT TTCTCGTGAA CTAGCACGGC GCAAAATTGA TGTTCCACAA GCATTTGCTA AATTAAAAAA GATTGATCGC CAAAAGATGC CAAGATGGCA AAATTGGTAC GAATCATTTG CCGCTGCAAT TTTAAGTGGC GCATTGATGA TTGTCTTTAC AGGCAATGTT TCTGATTCTT GGGCCGGCTT CCTTGCCGGT GGGATAGGCT ATGCTGCGTT TTCATATCTC TTACGAAAAT TTAAGATTCA GTATTTAGGA GAGTTTTGTT CTTCCTTGAT TATAGGTATT TTAGCGGTGA TCTTTGTTAA GATGCACCTC GCTAATAATA TTAATGATAT TATTATTGGC GCAGTTATGC CTCTGGTTCC TGGAGTGCCC TTAACTAATG CGGCGCGGGA TTTAGTTTCA GGAAATTTAA TCAGCGGACC CACAAGAGGG ATTGAGGCGA TCCTAACTGC CGTTTCGATT GGTAGCGCGA TAGTAATTGT TTTGCACTTT AATTAG
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Protein sequence | MLTKRRQALA LKTCLLAGRL LIENGSNMER VNDTLSRMAQ SAGLHDFQAF TTVTGIVVGT INDPHAQVIT IRHRKNNLSK IAEVNEVSRE LARRKIDVPQ AFAKLKKIDR QKMPRWQNWY ESFAAAILSG ALMIVFTGNV SDSWAGFLAG GIGYAAFSYL LRKFKIQYLG EFCSSLIIGI LAVIFVKMHL ANNINDIIIG AVMPLVPGVP LTNAARDLVS GNLISGPTRG IEAILTAVSI GSAIVIVLHF N
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