Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1463 |
Symbol | |
ID | 5188351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1519369 |
End bp | 1520685 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640591309 |
Product | protein translocase subunit secY/sec61 alpha |
Protein accession | YP_001272046 |
Protein GI | 148544676 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000110167 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCACAG CCGTCAAAAA TGCATTCAAG GTAAAAGATA TCCGTAAAAA GATTTTCTTT ACATTGTTTG TATTGATTGT CTATCGGATT GGGGCAGCGA TTACCGTTCC TGGAGTTAAC GCTGCTGCTT TGCAGGAAAT CTCCTCAACC GGTTTAGCAT CAATCCTCAA TACCTTTAGT GGTGGTGGAT TGGAGAATTA CTCTTTATTT GCAATGGGAG TGTCTCCATA TATTACTGCG CAAATTGTTG TTCAACTATT ACAAATGGAT ATTGTTCCGC GTTTTGTTGA ATGGAGTAAA CAAGGAGAAG TAGGACGGCG AAAACTTAAT CAAGCAACCC GATGGTTAAC GATTGTACTT GGATTTATTC AATCAATCGG TATTACCGCC GGGTTTAATG CATTGAGTAC TATTCGTTTG GTTAATCACC CTGGTGTTCA AACGTATTTA ACAATCGGTT TAATTTTAAC TGCAGGTACA ATGTTTGCTA CTTGGATGGG AGACATGATT ACTGAACGTG GCTTGGGTAA TGGTGTTTCC ATGTTAATTT TTGCTGGTAT TGTTGCGCAA ATGCCAGGTG GAATTCGTCA GTTATGGGAT GACCAAATTG CTGGTGAATC TGGTTCTGCT TTGTGGATGG GAATTGGATT TGTTACTCTT GTTATTGTTG CAATTTTAAT TATTGTAGCG TTTGTCACAT GGGTCCAACA GGCGGAAAGA CGTCTACCAA TTCAATACAC AAGACGGACC ACTACTTCAC CATCCAGTAG TTATCTTCCC TTGAAGATTA ACGTATCAGG TGTTATTCCT GTTATTTTTG CTGGTTCTTT TATCTCAACC CCGCAAACTA TTCTTATGGC TTTCCAGCAA AACCATGGTG GGGATAGTTG GTATCAAATC ATGACGACCA TTTTTAACAT GCAATCTGGT CCTGGGATCG CACTGTATGT ATTTTTGATT GTTGTATTTA CCTTTTTCTA TGCCTTTGTT CAGGTTAACC CAGAAAAACT TGCTGAGAAT TTACAAAAGC AAGGAAGTTA TATTTCTGGA GTACGTCCTG GAAAGGGTAC ACAAGACTAT ATTTCTTCAT TGTTAATGCG ATTGAGTACA GTAGGTTCAT TATTCTTAGG ATTAATCTCC TTAATTCCGT TAATTGCAAG TAACGTATGG AACCTAAGTC AGTCAATTGG TTTAGGTGGT ACAAGCTTAC TGATTATCGT ACAAATTGCT TTAGATGTTG TTCGACAGTT AAACGGACTA ACAATGAAGC GCGAATATAT TGGATTTATT CGAGAACCTA AAGGAGGAAA TGACTAA
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Protein sequence | MFTAVKNAFK VKDIRKKIFF TLFVLIVYRI GAAITVPGVN AAALQEISST GLASILNTFS GGGLENYSLF AMGVSPYITA QIVVQLLQMD IVPRFVEWSK QGEVGRRKLN QATRWLTIVL GFIQSIGITA GFNALSTIRL VNHPGVQTYL TIGLILTAGT MFATWMGDMI TERGLGNGVS MLIFAGIVAQ MPGGIRQLWD DQIAGESGSA LWMGIGFVTL VIVAILIIVA FVTWVQQAER RLPIQYTRRT TTSPSSSYLP LKINVSGVIP VIFAGSFIST PQTILMAFQQ NHGGDSWYQI MTTIFNMQSG PGIALYVFLI VVFTFFYAFV QVNPEKLAEN LQKQGSYISG VRPGKGTQDY ISSLLMRLST VGSLFLGLIS LIPLIASNVW NLSQSIGLGG TSLLIIVQIA LDVVRQLNGL TMKREYIGFI REPKGGND
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