| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1452 |
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| Symbol | truA |
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| ID | 5188242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1512458 |
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| End bp | 1513228 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640591298 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001272035 |
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| Protein GI | 148544665 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000896278 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCGTT ATAAAATAAC CTTTGCTTAT GATGGAACCA ATTTTTCCGG TTTCCAAATT
CAACCAAATA AGCGGACAGT TGAACAAACA TTAAAGAATG CAGTAAATAA AATTGCTAAG
CACCCAACTC CTGCTATTCC CGTTATCGGC TCAGGAAGAA CAGATGCAGG AGTTCATGCT
CTGAATCAGG TTGCGCACTT TGATATTCCC TATCATTTAA GTAATGAATC GATGAGAAAG
GCCCTCAACA GCATTTTGCC ACTGGATATT TTAATTAAGA AAGCTGAATT AGTTGATAAT
GACTTTCATG CGCGTTATAG TGCTCATCGT AAAACTTATC GTTATCGGGT TGATCAGGGG
GAATTTGTGA ATCCTTTTAA ACGTAACTAT ACTTCTCATT TTAAATATCC TCTTAACTTA
GAAAAAATGA GAAAAGCAGC TGATGATTTG GTTGGAACTC ATGATTTTAC AAGTTTTGTT
GCATCAGGAA GTCAAGCAAA AAGTAATGTT CGGACGATTG AGAATATTAC AATTAAACGC
GATGAGGTAA GAAATGAAGT CGTCTTTGAC TTTACTGGTA ATGGTTTCCT TTATAATCAA
GTTCGAATAA TGGTCGCTTT TCTTTTAGAA ATCGGGAGCA ATCAGCGACC AGTAGATGAC
GTGTCTCGAG TCCTTAAGGC GAAGGATCGG ACATTGGCAC GGATGACAGC GCCAGCGAGT
GGTTTATATT TAGTTAATGT AGATTATGGA ACAAATGATG AAAAGGATTG A
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| Protein sequence | MYRYKITFAY DGTNFSGFQI QPNKRTVEQT LKNAVNKIAK HPTPAIPVIG SGRTDAGVHA
LNQVAHFDIP YHLSNESMRK ALNSILPLDI LIKKAELVDN DFHARYSAHR KTYRYRVDQG
EFVNPFKRNY TSHFKYPLNL EKMRKAADDL VGTHDFTSFV ASGSQAKSNV RTIENITIKR
DEVRNEVVFD FTGNGFLYNQ VRIMVAFLLE IGSNQRPVDD VSRVLKAKDR TLARMTAPAS
GLYLVNVDYG TNDEKD
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