| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1377 |
|---|
| Symbol | |
|---|
| ID | 5188216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1437283 |
|---|
| End bp | 1438050 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591225 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001271963 |
|---|
| Protein GI | 148544593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00110436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATATTA AAATCTTAGT GGCTGTCCAT AAAAATTATC GGATGCCAGA TGATCCAATG
TATTTACCAG TTTTTGTTGG TAAAGAGATT CACCCGACTG TTAATCGTAC ATTTCAGGGT
GATAACACCG GAGATAATAT TTCAAAAAAG AATCCGCACT ACAATGAGTT AACAGCTCTG
TACTGGGGAT GGAAAAATCT TGATGTGGAT GCGTTAGGAT TAGTCCACTA CCGTCGTTAC
TTAACGATGG GGCACTCAAA GGATCTTTCG ACCATCCTCA ATCATGAACA GGTTGAAGAG
TTATTGACAG ATGCCGATGT AATCTTGCCA AAGAAGCGGC ATTACTACAT TGAAACAAAT
GAATCACATT ACCTCCATGT TCATGAGCAC GAGCCGCTTG AAATTACGCG GCAGGTGTTA
AAGGAGAAAT ATCCTCAGTA CTTACCCGCT TTTGAAAAAG TAATGAAACA GACATCGGCT
CATTATTTCA ACATGATGAT TATGAAGAAG CAGCCGTTGG ATGAATATTG TACCTGGCTG
TTTGATGTTT TAGGCGAAGT TGATAAAAAA GTTGATTATT CTGACTATAC ACCATATGAG
CAACGGGTCT TTGGCTTTTT AAGTGAGCTT TTACTAGATA CTTGGTTGTT GACTAATCCG
CAATACAAGA CAGTGGAAGT TAACCGGGTA TTTCTTGAAA AGCAAAACTG GCCATTAAAG
ATTGTGAAGT TCTTAAAACG TAAAGTTACC GGTCATGGTG AGCATTAA
|
|---|
| Protein sequence | MNIKILVAVH KNYRMPDDPM YLPVFVGKEI HPTVNRTFQG DNTGDNISKK NPHYNELTAL
YWGWKNLDVD ALGLVHYRRY LTMGHSKDLS TILNHEQVEE LLTDADVILP KKRHYYIETN
ESHYLHVHEH EPLEITRQVL KEKYPQYLPA FEKVMKQTSA HYFNMMIMKK QPLDEYCTWL
FDVLGEVDKK VDYSDYTPYE QRVFGFLSEL LLDTWLLTNP QYKTVEVNRV FLEKQNWPLK
IVKFLKRKVT GHGEH
|
|---|
| |